Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR58790 Gene

Subcategory (RNA class) for PIR58790 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58790 Gene

No Aliases found

ORGUL Members for PIR58790 Gene

Previous GeneCards Identifiers for PIR58790 Gene

  • GC09M135559

No data available for External Ids for PIR58790 Gene

Summaries for PIR58790 Gene

GeneCards Summary for PIR58790 Gene

PIR58790 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58790 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58790 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58790 Gene

Genomics for PIR58790 Gene

GeneHancer (GH) Regulatory Elements for PIR58790 Gene

Promoters and enhancers for PIR58790 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I132673 Enhancer 0.9 Ensembl ENCODE 0.4 +10.2 10172 0.6 CTCF BACH1 SIN3A FEZF1 TEAD3 ZNF316 MAFK SRF HLF MAFG DDX31 GTF3C4 PIR44565 PIR58790
GH09I132671 Enhancer 0.8 ENCODE 0.4 +11.6 11634 0.2 CTCF ARNT TEAD4 TAL1 CEBPG ZNF280A FOSL1 ZNF324 TCF12 CTBP1 DDX31 PIR44565 TSC1 TTF1 MED27 GTF3C4 MED22 PIR58790
GH09I132672 Enhancer 0.6 ENCODE 0.4 +11.2 11224 0.2 CTCF CEBPG MNT ELF1 ZNF217 CTBP1 GATA3 ZNF366 CREB1 PRDM1 PIR44565 DDX31 GTF3C4 PIR58790
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58790 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58790 Gene

Genomic Locations for PIR58790 Gene
chr9:132,683,644-132,683,673
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr9:135,559,031-135,559,060
(GRCh37/hg19)

Genomic View for PIR58790 Gene

Genes around PIR58790 on UCSC Golden Path with GeneCards custom track

PIR58790 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58790 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58790 Gene

Proteins for PIR58790 Gene

Post-translational modifications for PIR58790 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58790 Gene

Domains & Families for PIR58790 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58790 Gene

Function for PIR58790 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58790 Gene

Localization for PIR58790 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58790 Gene

Pathways & Interactions for PIR58790 Gene

SuperPathways for PIR58790 Gene

No Data Available

Interacting Proteins for PIR58790 Gene

Gene Ontology (GO) - Biological Process for PIR58790 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58790 Gene

Drugs & Compounds for PIR58790 Gene

No Compound Related Data Available

Transcripts for PIR58790 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58790 Gene

No ASD Table

Relevant External Links for PIR58790 Gene

GeneLoc Exon Structure for
PIR58790

No data available for mRNA/cDNA for PIR58790 Gene

Expression for PIR58790 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58790 Gene

Orthologs for PIR58790 Gene

No data available for Orthologs and Evolution for PIR58790 Gene

Paralogs for PIR58790 Gene

No data available for Paralogs for PIR58790 Gene

Variants for PIR58790 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58790 Gene

Disorders for PIR58790 Gene

No disorders were found for PIR58790 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58790 Gene

Publications for PIR58790 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58790 Gene

Sources for PIR58790 Gene

Content
Loading form....