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Aliases for PIR58735 Gene

Subcategory (RNA class) for PIR58735 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58735 Gene

No Aliases found

ORGUL Members for PIR58735 Gene

Previous GeneCards Identifiers for PIR58735 Gene

  • GC05M158689

No data available for External Ids for PIR58735 Gene

Summaries for PIR58735 Gene

GeneCards Summary for PIR58735 Gene

PIR58735 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58735 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58735 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58735 Gene

Genomics for PIR58735 Gene

GeneHancer (GH) Regulatory Elements for PIR58735 Gene

Promoters and enhancers for PIR58735 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J159262 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 -0.7 -725 2.9 PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 POLR2B E2F8 ZNF207 PIR58735 PIR35363 UBLCP1 ENSG00000253256 RNF145 PIR56064
GH05J159240 Enhancer 1.2 FANTOM5 ENCODE 0.3 +22.2 22203 0.9 PKNOX1 ATF1 SIN3A FEZF1 GATA2 ATF7 FOS TSHZ1 MEF2D SMARCA4 RNF145 ENSG00000253256 UBLCP1 IL12B LINC01932 GC05P159231 PIR58735
GH05J159230 Enhancer 0.6 dbSUPER 0.3 +31.8 31846 1.1 ELF3 SOX6 HLF CEBPB CEBPG EP300 ATF4 ZNF766 CEBPA PRDM10 ENSG00000252458 GC05P159231 EBF1 LINC02202 LINC01932 ENSG00000253256 PIR58735
GH05J159242 Enhancer 0.2 FANTOM5 0.4 +19.9 19932 0.2 RNF145 ENSG00000253256 UBLCP1 IL12B GC05P159231 PIR58735 LINC01932
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58735 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58735 Gene

Genomic Locations for PIR58735 Gene
chr5:159,262,739-159,262,766
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr5:158,689,747-158,689,774
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR58735 Gene

Genes around PIR58735 on UCSC Golden Path with GeneCards custom track

PIR58735 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58735 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58735 Gene

Function for PIR58735 Gene

Phenotypes From GWAS Catalog for PIR58735 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58735 Gene

Localization for PIR58735 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58735 Gene

Pathways & Interactions for PIR58735 Gene

SuperPathways for PIR58735 Gene

No Data Available

Interacting Proteins for PIR58735 Gene

Gene Ontology (GO) - Biological Process for PIR58735 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58735 Gene

Drugs & Compounds for PIR58735 Gene

No Compound Related Data Available

Transcripts for PIR58735 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58735 Gene

No ASD Table

Relevant External Links for PIR58735 Gene

GeneLoc Exon Structure for
PIR58735

No data available for mRNA/cDNA for PIR58735 Gene

Expression for PIR58735 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58735 Gene

Orthologs for PIR58735 Gene

No data available for Orthologs and Evolution for PIR58735 Gene

Paralogs for PIR58735 Gene

No data available for Paralogs for PIR58735 Gene

Variants for PIR58735 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58735 Gene

Disorders for PIR58735 Gene

No disorders were found for PIR58735 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58735 Gene

Publications for PIR58735 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58735 Gene

Sources for PIR58735 Gene

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