Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR58717 Gene

Subcategory (RNA class) for PIR58717 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58717 Gene

No Aliases found

ORGUL Members for PIR58717 Gene

Previous GeneCards Identifiers for PIR58717 Gene

  • GC08P009680

No data available for External Ids for PIR58717 Gene

Summaries for PIR58717 Gene

GeneCards Summary for PIR58717 Gene

PIR58717 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58717 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58717 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58717 Gene

Genomics for PIR58717 Gene

GeneHancer (GH) Regulatory Elements for PIR58717 Gene

Promoters and enhancers for PIR58717 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I009830 Enhancer 0.8 ENCODE 0.4 +7.7 7724 0.2 CTCF LEF1 CEBPG ZSCAN9 RAD21 RFX5 NCOA2 GATA3 SCRT2 SMC3 MIR597 PIR58717 GC08M009858
GH08I009781 Enhancer 1 ENCODE 0.3 -41.2 -41221 2.1 FOXA2 MLX ARID4B DMAP1 IRF4 ZNF48 YY1 SLC30A9 ATF7 RUNX3 MIR597 ERI1 GC08P009742 PIR58717 TNKS
GH08I009829 Enhancer 0.5 ENCODE 0.4 +6.3 6254 0.2 CTCF PKNOX1 ZNF654 TRIM22 SMC3 REST RAD21 MIR597 PIR58717 GC08M009858
GH08I009803 Enhancer 0.4 ENCODE 0.4 -19.3 -19346 0.2 JUND JUN PIR58717 GC08P009742
GH08I009828 Enhancer 0.4 ENCODE 0.4 +5.3 5314 0.2 KLF1 JUND GLIS1 MIR597 PIR58717 GC08M009858
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58717 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58717 Gene

Genomic Locations for PIR58717 Gene
chr8:9,823,352-9,823,381
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr8:9,680,862-9,680,891
(GRCh37/hg19)

Genomic View for PIR58717 Gene

Genes around PIR58717 on UCSC Golden Path with GeneCards custom track

PIR58717 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58717 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58717 Gene

Proteins for PIR58717 Gene

Post-translational modifications for PIR58717 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58717 Gene

Domains & Families for PIR58717 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58717 Gene

Function for PIR58717 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58717 Gene

Localization for PIR58717 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58717 Gene

Pathways & Interactions for PIR58717 Gene

SuperPathways for PIR58717 Gene

No Data Available

Interacting Proteins for PIR58717 Gene

Gene Ontology (GO) - Biological Process for PIR58717 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58717 Gene

Drugs & Compounds for PIR58717 Gene

No Compound Related Data Available

Transcripts for PIR58717 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58717 Gene

No ASD Table

Relevant External Links for PIR58717 Gene

GeneLoc Exon Structure for
PIR58717

No data available for mRNA/cDNA for PIR58717 Gene

Expression for PIR58717 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58717 Gene

Orthologs for PIR58717 Gene

No data available for Orthologs and Evolution for PIR58717 Gene

Paralogs for PIR58717 Gene

No data available for Paralogs for PIR58717 Gene

Variants for PIR58717 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58717 Gene

Disorders for PIR58717 Gene

No disorders were found for PIR58717 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58717 Gene

Publications for PIR58717 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58717 Gene

Sources for PIR58717 Gene

Content
Loading form....