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Aliases for PIR58326 Gene

Subcategory (RNA class) for PIR58326 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58326 Gene

No Aliases found

ORGUL Members for PIR58326 Gene

Previous GeneCards Identifiers for PIR58326 Gene

  • GC12M050610

No data available for External Ids for PIR58326 Gene

Summaries for PIR58326 Gene

GeneCards Summary for PIR58326 Gene

PIR58326 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58326 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58326 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58326 Gene

Genomics for PIR58326 Gene

GeneHancer (GH) Regulatory Elements for PIR58326 Gene

Promoters and enhancers for PIR58326 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J050215 Enhancer 0.4 ENCODE dbSUPER 600.7 +0.8 765 0.7 PIR58326 CERS5 LIMA1 GC12M050135 ENSG00000257298
GH12J050200 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.4 +14.5 14527 4.6 SP1 FOSL2 CREB1 POLR2A ZIC2 ZNF24 CTBP1 SMARCC1 BRCA1 CEBPB LIMA1 CERS5 RNU6-1093P COX14 LARP4 FAM186A ATF1 PIR58326 ENSG00000257298 GC12M050135
GH12J050209 Enhancer 0.9 ENCODE dbSUPER 0.7 +4.3 4283 5.6 ZNF121 MAFK RAD21 ZBTB33 REST PKNOX1 ZNF316 POLR2A RUNX3 ZSCAN29 CERS5 PIR58326 GC12M050135 ENSG00000257298 LIMA1
GH12J050195 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +20.3 20310 3.3 ZNF384 SP7 PKNOX1 ZBTB8A ZNF600 ZEB2 ZNF692 ZNF501 ZNF561 SCRT2 CERS5 ENSG00000257298 PIR58326 GC12M050135 LIMA1
GH12J050191 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +24.2 24189 2 PRDM1 ZNF501 JUND JUN SIX4 FEZF1 ZBTB33 PRDM6 ZFP37 ZNF362 ENSG00000257298 CERS5 PRPF40B PIR58326 GC12M050135 LIMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR58326 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58326 Gene

Genomic Locations for PIR58326 Gene
chr12:50,216,986-50,217,014
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr12:50,610,769-50,610,797
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR58326 Gene

Genes around PIR58326 on UCSC Golden Path with GeneCards custom track

PIR58326 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58326 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58326 Gene

Proteins for PIR58326 Gene

Post-translational modifications for PIR58326 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58326 Gene

Domains & Families for PIR58326 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58326 Gene

Function for PIR58326 Gene

Phenotypes From GWAS Catalog for PIR58326 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58326 Gene

Localization for PIR58326 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58326 Gene

Pathways & Interactions for PIR58326 Gene

PathCards logo

SuperPathways for PIR58326 Gene

No Data Available

Interacting Proteins for PIR58326 Gene

Gene Ontology (GO) - Biological Process for PIR58326 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58326 Gene

Drugs & Compounds for PIR58326 Gene

No Compound Related Data Available

Transcripts for PIR58326 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58326 Gene

No ASD Table

Relevant External Links for PIR58326 Gene

GeneLoc Exon Structure for
PIR58326

No data available for mRNA/cDNA for PIR58326 Gene

Expression for PIR58326 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58326 Gene

Orthologs for PIR58326 Gene

No data available for Orthologs and Evolution for PIR58326 Gene

Paralogs for PIR58326 Gene

No data available for Paralogs for PIR58326 Gene

Variants for PIR58326 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58326 Gene

Disorders for PIR58326 Gene

No disorders were found for PIR58326 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58326 Gene

Publications for PIR58326 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR58326 Gene

Products for PIR58326 Gene

Sources for PIR58326 Gene

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