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Aliases for PIR58143 Gene

Subcategory (RNA class) for PIR58143 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58143 Gene

No Aliases found

ORGUL Members for PIR58143 Gene

Previous GeneCards Identifiers for PIR58143 Gene

  • GC02P111161
  • GC02P111167
  • GC02P111181
  • GC02P111188
  • GC02P111202

No data available for External Ids for PIR58143 Gene

Summaries for PIR58143 Gene

GeneCards Summary for PIR58143 Gene

PIR58143 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58143 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58143 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58143 Gene

Genomics for PIR58143 Gene

GeneHancer (GH) Regulatory Elements for PIR58143 Gene

Promoters and enhancers for PIR58143 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J221443 Enhancer 0.7 Ensembl ENCODE 600.7 +1.7 1657 2 FOS JUN JUND ZNF362 GC02P221443 GC02P221444 GC02P221445 GC02P221446 PIR58143 GC02M221456 EPHA4
GH02J221441 Enhancer 0.2 Ensembl 600.7 -0.5 -543 0.4 GC02P221443 GC02P221444 GC02P221445 GC02P221446 PIR58143 GC02M221400 EPHA4
GH02J221447 Enhancer 0.5 Ensembl 0.7 +5.0 4957 0.6 USF1 GATA3 FOXA1 FOS USF2 EPHA4 GC02P221443 GC02P221444 GC02P221445 GC02P221446 PIR58143 GC02M221456
GH02J221500 Promoter/Enhancer 1.3 Ensembl ENCODE 0.2 +59.6 59587 2.4 SP7 MZF1 PKNOX1 ZNF600 ZEB2 ZNF629 TCF7L2 ZNF341 ZNF561 FOXA1 GC02M221456 EPHA4 PIR58143 GC02P221443 GC02P221444 GC02P221445 GC02P221446
GH02J221448 Enhancer 0.6 Ensembl 0.4 +6.4 6367 1.8 PKNOX1 PRDM10 TCF7L2 ZXDB OSR2 ZNF843 PRDM6 BCL6B GC02P221443 GC02P221444 GC02P221445 GC02P221446 PIR58143 GC02M221456 EPHA4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR58143 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58143 Gene

Genomic Locations for PIR58143 Gene
chr2:221,442,544-221,442,572
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr2:111,153,632-111,153,660
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR58143 Gene

Genes around PIR58143 on UCSC Golden Path with GeneCards custom track

PIR58143 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58143 Gene

Proteins for PIR58143 Gene

Post-translational modifications for PIR58143 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58143 Gene

Domains & Families for PIR58143 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58143 Gene

Function for PIR58143 Gene

Phenotypes From GWAS Catalog for PIR58143 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58143 Gene

Localization for PIR58143 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58143 Gene

Pathways & Interactions for PIR58143 Gene

PathCards logo

SuperPathways for PIR58143 Gene

No Data Available

Interacting Proteins for PIR58143 Gene

Gene Ontology (GO) - Biological Process for PIR58143 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58143 Gene

Drugs & Compounds for PIR58143 Gene

No Compound Related Data Available

Transcripts for PIR58143 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58143 Gene

No ASD Table

Relevant External Links for PIR58143 Gene

GeneLoc Exon Structure for
PIR58143

No data available for mRNA/cDNA for PIR58143 Gene

Expression for PIR58143 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58143 Gene

Orthologs for PIR58143 Gene

No data available for Orthologs and Evolution for PIR58143 Gene

Paralogs for PIR58143 Gene

No data available for Paralogs for PIR58143 Gene

Variants for PIR58143 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58143 Gene

Disorders for PIR58143 Gene

No disorders were found for PIR58143 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58143 Gene

Publications for PIR58143 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR58143 Gene

Products for PIR58143 Gene

Sources for PIR58143 Gene

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