Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR57702 Gene

Subcategory (RNA class) for PIR57702 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR57702 Gene

No Aliases found

ORGUL Members for PIR57702 Gene

Previous GeneCards Identifiers for PIR57702 Gene

  • GC12M057352

No data available for External Ids for PIR57702 Gene

Summaries for PIR57702 Gene

GeneCards Summary for PIR57702 Gene

PIR57702 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR57702 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR57702 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR57702 Gene

Genomics for PIR57702 Gene

GeneHancer (GH) Regulatory Elements for PIR57702 Gene

Promoters and enhancers for PIR57702 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J056957 Promoter/Enhancer 1.2 EPDnew Ensembl 600.7 +0.4 352 0.9 NFIB SP1 RXRA FOXA2 YY1 GATA3 CTCF HNF4A ZNF687 MAX PIR57702 RDH16 ENSG00000278400 LOC100420982
GH12J056940 Promoter/Enhancer 1.5 Ensembl ENCODE 0.4 +16.2 16177 1.7 ZNF652 ELF3 CBFA2T2 CEBPG RERE BACH1 MAFK SP1 HNF1A PPARG ENSG00000278400 LOC100420982 NACA MYO1A SDR9C7 PIR57702
GH12J056954 Enhancer 0.6 Ensembl 0.7 +2.6 2611 2.2 CEBPG SP1 RXRA CEBPA CEBPB JUND ATF3 YY1 RAD21 HNF4A MYO1A NABP2 PIR57702 RDH16 LOC100420982 ENSG00000278400
GH12J056947 Enhancer 0.6 Ensembl 0.4 +9.9 9912 0.4 CTCF SP1 REST EGR1 TGIF2 FOXA2 YY1 RAD21 CBFA2T3 GPR182 LRP1 SDR9C7 PIR57702 LOC100420982 ENSG00000278400
GH12J056950 Enhancer 0.2 Ensembl 0.4 +6.7 6711 1.2 GPR182 LRP1 PIR57702 LOC100420982 RDH16 ENSG00000278400
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR57702 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR57702 Gene

Genomic Locations for PIR57702 Gene
chr12:56,957,886-56,957,912
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr12:57,351,670-57,351,696
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR57702 Gene

Genes around PIR57702 on UCSC Golden Path with GeneCards custom track

PIR57702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR57702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR57702 Gene

Proteins for PIR57702 Gene

Post-translational modifications for PIR57702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR57702 Gene

Domains & Families for PIR57702 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR57702 Gene

Function for PIR57702 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR57702 Gene

Localization for PIR57702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR57702 Gene

Pathways & Interactions for PIR57702 Gene

PathCards logo

SuperPathways for PIR57702 Gene

No Data Available

Interacting Proteins for PIR57702 Gene

Gene Ontology (GO) - Biological Process for PIR57702 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR57702 Gene

Drugs & Compounds for PIR57702 Gene

No Compound Related Data Available

Transcripts for PIR57702 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR57702 Gene

No ASD Table

Relevant External Links for PIR57702 Gene

GeneLoc Exon Structure for
PIR57702

No data available for mRNA/cDNA for PIR57702 Gene

Expression for PIR57702 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR57702 Gene

Orthologs for PIR57702 Gene

No data available for Orthologs and Evolution for PIR57702 Gene

Paralogs for PIR57702 Gene

No data available for Paralogs for PIR57702 Gene

Variants for PIR57702 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR57702 Gene

Disorders for PIR57702 Gene

No disorders were found for PIR57702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR57702 Gene

Publications for PIR57702 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR57702 Gene

Products for PIR57702 Gene

Sources for PIR57702 Gene

Content
Loading form....