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Aliases for PIR57485 Gene

Subcategory (RNA class) for PIR57485 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR57485 Gene

No Aliases found

Previous GeneCards Identifiers for PIR57485 Gene

  • GC15M040887
  • GC06P028185

No data available for External Ids for PIR57485 Gene

Summaries for PIR57485 Gene

GeneCards Summary for PIR57485 Gene

PIR57485 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR57485 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR57485

Additional gene information for PIR57485 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR57485 Gene

Genomics for PIR57485 Gene

GeneHancer (GH) Regulatory Elements for PIR57485 Gene

Promoters and enhancers for PIR57485 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I054255 Enhancer 0.6 Ensembl ENCODE 0.4 -9.5 -9459 1.5 JUN NFE2 NFE2L2 GCLC PIR57485 GC06M054197 MLIP
GH06I054281 Enhancer 0.4 ENCODE 0.4 +17.0 17047 1.3 JUND FOSL2 ELF1 TINAG GC06M054286 PIR57485
GH06I054238 Enhancer 0.4 ENCODE 0.3 -26.9 -26904 0.9 ZSCAN16 FOXP2 PIR57485 GC06M054197 MLIP
GH06I054204 Enhancer 0.6 ENCODE 0.2 -60.3 -60320 1.2 SOX5 SOX13 FOXA2 HMG20A ZNF644 TEAD3 TCF7 PRDM10 NR2F6 CREM GC06M054197 PIR57485 MLIP
GH06I054283 Enhancer 0.2 ENCODE 0.4 +18.9 18945 1.8 TINAG GC06M054286 PIR57485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR57485 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR57485 Gene

Genomic Locations for PIR57485 Gene
chr6:54,265,370-54,265,402
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand
chr6:28,180,814-28,180,846
(GRCh37/hg19)

Genomic View for PIR57485 Gene

Genes around PIR57485 on UCSC Golden Path with GeneCards custom track

PIR57485 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR57485 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR57485 Gene

ORGUL Member Location for PIR57485 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR57485 Gene

Proteins for PIR57485 Gene

Post-translational modifications for PIR57485 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR57485 Gene

Domains & Families for PIR57485 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR57485 Gene

Function for PIR57485 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR57485 Gene

Localization for PIR57485 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR57485 Gene

Pathways & Interactions for PIR57485 Gene

SuperPathways for PIR57485 Gene

No Data Available

Interacting Proteins for PIR57485 Gene

Gene Ontology (GO) - Biological Process for PIR57485 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR57485 Gene

Drugs & Compounds for PIR57485 Gene

No Compound Related Data Available

Transcripts for PIR57485 Gene

fRNAdb Secondary structures for PIR57485 Gene

  • FR132630
  • FR015388
  • FR151773
  • FR053391
  • FR041418

Alternative Splicing Database (ASD) splice patterns (SP) for PIR57485 Gene

No ASD Table

Relevant External Links for PIR57485 Gene

GeneLoc Exon Structure for
PIR57485

No data available for mRNA/cDNA for PIR57485 Gene

Expression for PIR57485 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR57485 Gene

Orthologs for PIR57485 Gene

No data available for Orthologs and Evolution for PIR57485 Gene

Paralogs for PIR57485 Gene

No data available for Paralogs for PIR57485 Gene

Variants for PIR57485 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR57485 Gene

Disorders for PIR57485 Gene

No disorders were found for PIR57485 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR57485 Gene

Publications for PIR57485 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR57485 Gene

Sources for PIR57485 Gene

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