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Aliases for PIR57270 Gene

Subcategory (RNA class) for PIR57270 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR57270 Gene

No Aliases found

ORGUL Members for PIR57270 Gene

Previous GeneCards Identifiers for PIR57270 Gene

  • GC0XP089959

No data available for External Ids for PIR57270 Gene

Summaries for PIR57270 Gene

GeneCards Summary for PIR57270 Gene

PIR57270 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR57270 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR57270 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR57270 Gene

Genomics for PIR57270 Gene

GeneHancer (GH) Regulatory Elements for PIR57270 Gene

Promoters and enhancers for PIR57270 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I024730 Enhancer 0.4 ENCODE 550.8 +1.2 1202 1.3 JUND ZBTB40 PIR57270 SOD3 CCDC149 ENSG00000251638
GH04I024729 Enhancer 0.2 ENCODE 550.8 +0.2 236 0 PIR57270 SOD3 CCDC149 ENSG00000251638
GH04I024752 Enhancer 0.6 ENCODE 0.3 +24.3 24299 2 PKNOX1 RFX1 DPF2 MNT FOXA1 CREB1 CUX1 FOS NFE2L2 SOD3 LGI2 ENSG00000251638 PIR57270
GH04I024687 Enhancer 0.6 ENCODE 0.3 -42.2 -42215 0.6 CTCF PKNOX1 ATF1 RB1 TRIM22 ZNF384 REST RAD21 GATA3 GATA2 DHX15 MIR573 SOD3 LINC02473 PIR57270
GH04I024720 Enhancer 0.4 ENCODE 0.4 -8.5 -8465 0.8 POU5F1 BACH1 DHX15 PIR57270 LINC02473
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR57270 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR57270 Gene

Genomic Locations for PIR57270 Gene
chr4:24,729,565-24,729,595
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chrX:89,959,741-89,959,771
(GRCh37/hg19)

Genomic View for PIR57270 Gene

Genes around PIR57270 on UCSC Golden Path with GeneCards custom track

PIR57270 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR57270 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR57270 Gene

Proteins for PIR57270 Gene

Post-translational modifications for PIR57270 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR57270 Gene

Domains & Families for PIR57270 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR57270 Gene

Function for PIR57270 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR57270 Gene

Localization for PIR57270 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR57270 Gene

Pathways & Interactions for PIR57270 Gene

SuperPathways for PIR57270 Gene

No Data Available

Interacting Proteins for PIR57270 Gene

Gene Ontology (GO) - Biological Process for PIR57270 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR57270 Gene

Drugs & Compounds for PIR57270 Gene

No Compound Related Data Available

Transcripts for PIR57270 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR57270 Gene

No ASD Table

Relevant External Links for PIR57270 Gene

GeneLoc Exon Structure for
PIR57270

No data available for mRNA/cDNA for PIR57270 Gene

Expression for PIR57270 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR57270 Gene

Orthologs for PIR57270 Gene

No data available for Orthologs and Evolution for PIR57270 Gene

Paralogs for PIR57270 Gene

No data available for Paralogs for PIR57270 Gene

Variants for PIR57270 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR57270 Gene

Disorders for PIR57270 Gene

No disorders were found for PIR57270 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR57270 Gene

Publications for PIR57270 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR57270 Gene

Sources for PIR57270 Gene

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