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Aliases for PIR57208 Gene

Subcategory (RNA class) for PIR57208 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR57208 Gene

No Aliases found

ORGUL Members for PIR57208 Gene

Previous GeneCards Identifiers for PIR57208 Gene

  • GC09P116403
  • GC09P113642
  • GC09P113752
  • GC09P114401
  • GC09P113753
  • GC09P113758
  • GC09P113760
  • GC09P113867
  • GC09P113993
  • GC09P114120
  • GC09P114253
  • GC09P114335

No data available for External Ids for PIR57208 Gene

Summaries for PIR57208 Gene

GeneCards Summary for PIR57208 Gene

PIR57208 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR57208 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR57208 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR57208 Gene

Genomics for PIR57208 Gene

GeneHancer (GH) Regulatory Elements for PIR57208 Gene

Promoters and enhancers for PIR57208 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J113619 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.7 -19740 5.3 SP1 ELF3 MAFK SP7 SP5 ZNF644 IKZF1 CREB1 GLIS2 POLR2A ZNF618 ALAD RGS3 ENSG00000233817 LOC105376222 PIR57208
GH09J113631 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.8 -7756 6.6 MNT MAFK SP1 EGR1 SMARCA4 POLR2A RXRA ZNF7 FOXA2 FOXK2 ALAD RNF183 C9orf43 RGS3 PIR57208 ENSG00000233817
GH09J113624 Enhancer 0.8 ENCODE dbSUPER 0.4 -16.4 -16353 1.4 SP1 RXRA JUND YY1 POLR2A RCOR1 HNF4A MAX HNF4G ENSG00000233817 LOC105376222 PIR57208
GH09J113626 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.4 -14.2 -14187 1.5 ALAD RNF183 ENSG00000233817 LOC105376222 PIR57208
GH09J113643 Enhancer 0.2 Ensembl 0.7 +2.2 2244 0.6 RNF183 C9orf43 LOC105376223 PIR57208
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR57208 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR57208 Gene

Genomic Locations for PIR57208 Gene
chr9:113,641,457-113,641,484
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr9:116,403,737-116,403,764
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR57208 Gene

Genes around PIR57208 on UCSC Golden Path with GeneCards custom track

PIR57208 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR57208 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR57208 Gene

Proteins for PIR57208 Gene

Post-translational modifications for PIR57208 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR57208 Gene

Domains & Families for PIR57208 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR57208 Gene

Function for PIR57208 Gene

Phenotypes From GWAS Catalog for PIR57208 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR57208 Gene

Localization for PIR57208 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR57208 Gene

Pathways & Interactions for PIR57208 Gene

PathCards logo

SuperPathways for PIR57208 Gene

No Data Available

Interacting Proteins for PIR57208 Gene

Gene Ontology (GO) - Biological Process for PIR57208 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR57208 Gene

Drugs & Compounds for PIR57208 Gene

No Compound Related Data Available

Transcripts for PIR57208 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR57208 Gene

No ASD Table

Relevant External Links for PIR57208 Gene

GeneLoc Exon Structure for
PIR57208

No data available for mRNA/cDNA for PIR57208 Gene

Expression for PIR57208 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR57208 Gene

Orthologs for PIR57208 Gene

No data available for Orthologs and Evolution for PIR57208 Gene

Paralogs for PIR57208 Gene

No data available for Paralogs for PIR57208 Gene

Variants for PIR57208 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR57208 Gene

Disorders for PIR57208 Gene

No disorders were found for PIR57208 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR57208 Gene

Publications for PIR57208 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR57208 Gene

Products for PIR57208 Gene

Sources for PIR57208 Gene

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