Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR56611 Gene

Subcategory (RNA class) for PIR56611 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR56611 Gene

No Aliases found

ORGUL Members for PIR56611 Gene

Previous GeneCards Identifiers for PIR56611 Gene

  • GC09M111325

No data available for External Ids for PIR56611 Gene

Summaries for PIR56611 Gene

GeneCards Summary for PIR56611 Gene

PIR56611 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56611 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56611 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56611 Gene

Genomics for PIR56611 Gene

GeneHancer (GH) Regulatory Elements for PIR56611 Gene

Promoters and enhancers for PIR56611 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J108561 Enhancer 0.6 ENCODE dbSUPER 650.7 +1.1 1053 2.1 SCRT2 FOS PIR56611 LOC105376214
GH09J108565 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.4 -2370 1.4 ELF3 CTCF IRF2 SIN3A RAD21 CTBP1 GATA3 ZNF316 ZNF143 SMC3 PIR56611 RPL36P14
GH09J108548 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.3 12279 5.7 NEUROD1 FEZF1 BRCA1 FOS DEK TSHZ1 ZNF592 MAFF GLIS1 STAT3 PIR56611 LOC105376214
GH09J108567 Enhancer 0.7 ENCODE 0.7 -4.1 -4074 1.1 TFAP4 FOXA2 NFIB MLX ZNF507 GATA3 FOS TCF7L2 MIXL1 STAT1 PIR56611 RPL36P14
GH09J108542 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 +20.4 20437 2.2 PKNOX1 INSM2 KLF17 SIN3A RAD21 ZNF366 SCRT2 RCOR1 KLF7 FOS PIR56611 LOC105376214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56611 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56611 Gene

Genomic Locations for PIR56611 Gene
chr9:108,563,499-108,563,527
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr9:111,325,779-111,325,807
(GRCh37/hg19)

Genomic View for PIR56611 Gene

Genes around PIR56611 on UCSC Golden Path with GeneCards custom track

PIR56611 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56611 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56611 Gene

Function for PIR56611 Gene

Phenotypes From GWAS Catalog for PIR56611 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56611 Gene

Localization for PIR56611 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56611 Gene

Pathways & Interactions for PIR56611 Gene

SuperPathways for PIR56611 Gene

No Data Available

Interacting Proteins for PIR56611 Gene

Gene Ontology (GO) - Biological Process for PIR56611 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56611 Gene

Drugs & Compounds for PIR56611 Gene

No Compound Related Data Available

Transcripts for PIR56611 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56611 Gene

No ASD Table

Relevant External Links for PIR56611 Gene

GeneLoc Exon Structure for
PIR56611

No data available for mRNA/cDNA for PIR56611 Gene

Expression for PIR56611 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56611 Gene

Orthologs for PIR56611 Gene

No data available for Orthologs and Evolution for PIR56611 Gene

Paralogs for PIR56611 Gene

No data available for Paralogs for PIR56611 Gene

Variants for PIR56611 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56611 Gene

Disorders for PIR56611 Gene

No disorders were found for PIR56611 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56611 Gene

Publications for PIR56611 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56611 Gene

Sources for PIR56611 Gene

Content
Loading form....