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Aliases for PIR56482 Gene

Subcategory (RNA class) for PIR56482 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR56482 Gene

No Aliases found

Previous GeneCards Identifiers for PIR56482 Gene

  • GC01M179793
  • GC01M180052
  • GC01M180257
  • GC01M180360
  • GC01M180460
  • GC01M180548
  • GC01M180643
  • GC01M180736

No data available for External Ids for PIR56482 Gene

Summaries for PIR56482 Gene

GeneCards Summary for PIR56482 Gene

PIR56482 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56482 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR56482

Additional gene information for PIR56482 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56482 Gene

Genomics for PIR56482 Gene

GeneHancer (GH) Regulatory Elements for PIR56482 Gene

Promoters and enhancers for PIR56482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179586 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE 650.7 +0.7 680 0.8 RB1 NFIB SIN3A YY1 ZNF121 GLIS2 EGR1 ATF7 EGR2 SMARCA5 LOC126860 GC01M180824 GC01M180836 GC01M180837 GC01M180838 GC01M180840 GC01M180841 GC01M180842 GC01M180844 GC01M180845
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56482 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56482 Gene

Genomic Locations for PIR56482 Gene
chr1:179,587,071-179,587,105
(GRCh38/hg38)
Size:
35 bases
Orientation:
Minus strand
chr1:179,558,990-179,559,020
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR56482 Gene

Genes around PIR56482 on UCSC Golden Path with GeneCards custom track

PIR56482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR56482 Gene

ORGUL Member Location for PIR56482 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56482 Gene

Function for PIR56482 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56482 Gene

Localization for PIR56482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56482 Gene

Pathways & Interactions for PIR56482 Gene

SuperPathways for PIR56482 Gene

No Data Available

Interacting Proteins for PIR56482 Gene

Gene Ontology (GO) - Biological Process for PIR56482 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56482 Gene

Drugs & Compounds for PIR56482 Gene

No Compound Related Data Available

Transcripts for PIR56482 Gene

fRNAdb Secondary structures for PIR56482 Gene

  • FR118042
  • FR131760

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56482 Gene

No ASD Table

Relevant External Links for PIR56482 Gene

GeneLoc Exon Structure for
PIR56482

No data available for mRNA/cDNA for PIR56482 Gene

Expression for PIR56482 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56482 Gene

Orthologs for PIR56482 Gene

No data available for Orthologs and Evolution for PIR56482 Gene

Paralogs for PIR56482 Gene

No data available for Paralogs for PIR56482 Gene

Variants for PIR56482 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56482 Gene

Disorders for PIR56482 Gene

No disorders were found for PIR56482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56482 Gene

Publications for PIR56482 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56482 Gene

Sources for PIR56482 Gene

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