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Aliases for PIR56474 Gene

Subcategory (RNA class) for PIR56474 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR56474 Gene

No Aliases found

ORGUL Members for PIR56474 Gene

Previous GeneCards Identifiers for PIR56474 Gene

  • GC10P047073

No data available for External Ids for PIR56474 Gene

Summaries for PIR56474 Gene

GeneCards Summary for PIR56474 Gene

PIR56474 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56474 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56474 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56474 Gene

Genomics for PIR56474 Gene

GeneHancer (GH) Regulatory Elements for PIR56474 Gene

Promoters and enhancers for PIR56474 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046473 Enhancer 0.6 ENCODE 650.7 +1.6 1555 2 KLF1 ZNF133 SIN3A REST SP1 SREBF1 FOSL2 EGR2 TCF7L2 PIR56474 NPY4R ENSG00000285402
GH10J046516 Enhancer 0.8 Ensembl ENCODE 0.3 -40.8 -40782 1.3 SIN3A REST SP1 ZNF335 JUND ZNF157 FOS FOSL2 ZFX MAFK GC10P046518 GPRIN2 PIR56474 ENSG00000285402
GH10J046501 Enhancer 0.6 FANTOM5 0.3 -25.0 -24976 0 ATF4 ZNF362 CEBPB ZNF384 ATF7 CEBPG MNT GC10P046518 PIR56474 ENSG00000285402
GH10J046498 Enhancer 0.5 FANTOM5 0.3 -22.4 -22372 0.2 ZNF316 NFATC3 NFYB ASH1L EMSY MAFK GC10P046518 PIR56474 ENSG00000285402
GH10J046512 Enhancer 0.5 ENCODE 0.3 -36.6 -36556 1.4 MCM3 MAX SIN3A FOSL2 MNT WASHC2C PARGP1 GC10P046518 PIR56474 ENSG00000285402
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56474 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56474 Gene

Genomic Locations for PIR56474 Gene
chr10:46,476,189-46,476,218
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr10:47,073,238-47,073,267
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR56474 Gene

Genes around PIR56474 on UCSC Golden Path with GeneCards custom track

PIR56474 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56474 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56474 Gene

Function for PIR56474 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56474 Gene

Localization for PIR56474 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56474 Gene

Pathways & Interactions for PIR56474 Gene

SuperPathways for PIR56474 Gene

No Data Available

Interacting Proteins for PIR56474 Gene

Gene Ontology (GO) - Biological Process for PIR56474 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56474 Gene

Drugs & Compounds for PIR56474 Gene

No Compound Related Data Available

Transcripts for PIR56474 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56474 Gene

No ASD Table

Relevant External Links for PIR56474 Gene

GeneLoc Exon Structure for
PIR56474

No data available for mRNA/cDNA for PIR56474 Gene

Expression for PIR56474 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56474 Gene

Orthologs for PIR56474 Gene

No data available for Orthologs and Evolution for PIR56474 Gene

Paralogs for PIR56474 Gene

No data available for Paralogs for PIR56474 Gene

Variants for PIR56474 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56474 Gene

Disorders for PIR56474 Gene

No disorders were found for PIR56474 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56474 Gene

Publications for PIR56474 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56474 Gene

Sources for PIR56474 Gene

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