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Aliases for PIR56447 Gene

Subcategory (RNA class) for PIR56447 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR56447 Gene

No Aliases found

ORGUL Members for PIR56447 Gene

Previous GeneCards Identifiers for PIR56447 Gene

  • GC11M011352

No data available for External Ids for PIR56447 Gene

Summaries for PIR56447 Gene

GeneCards Summary for PIR56447 Gene

PIR56447 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56447 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56447 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56447 Gene

Genomics for PIR56447 Gene

GeneHancer (GH) Regulatory Elements for PIR56447 Gene

Promoters and enhancers for PIR56447 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J000541 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -55.8 -55838 2.9 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B CSNK2A1 ACTG1P3 TBC1D20 RBCK1 GC20M000488 GC20M000487 PIR56447
GH20J000504 Enhancer 0.8 ENCODE 0.4 -17.3 -17340 1.1 ELF3 FOXA2 ARID4B RARA SMARCC2 THAP11 MIXL1 RXRA CEBPB NFIL3 RBCK1 SDCBP2-AS1 CSNK2A1 GC20M000487 GC20M000488 PIR56447
GH20J000510 Enhancer 0.9 ENCODE 0.3 -23.2 -23174 0.2 FOXA2 MLX ARID4B DMAP1 RXRA SP5 PPARG KAT8 NFIL3 MIER3 GC20M000487 GC20M000488 PIR56447 CSNK2A1
GH20J000496 Enhancer 0.6 ENCODE 0.4 -9.1 -9114 0.2 GATAD2A RXRA RAD21 GABPA YY1 SP1 JUND ATF3 EGR1 HNF4A TBC1D20 ENSG00000206797 NRSN2 NRSN2-AS1 CSNK2A1 PIR56447 GC20M000488 GC20M000487
GH20J000509 Enhancer 0.7 ENCODE 0.3 -22.3 -22336 1.2 FOXA2 MAX DMAP1 ZNF205 FOXK2 MAFK SMARCA5 SOX5 TFE3 HLF GC20M000487 GC20M000488 PIR56447 CSNK2A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56447 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56447 Gene

Genomic Locations for PIR56447 Gene
chr20:487,478-487,508
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr20:468,122-468,152
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR56447 Gene

Genes around PIR56447 on UCSC Golden Path with GeneCards custom track

PIR56447 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56447 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR56447 Gene

ORGUL Member Location for PIR56447 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56447 Gene

Function for PIR56447 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56447 Gene

Localization for PIR56447 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56447 Gene

Pathways & Interactions for PIR56447 Gene

SuperPathways for PIR56447 Gene

No Data Available

Interacting Proteins for PIR56447 Gene

Gene Ontology (GO) - Biological Process for PIR56447 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56447 Gene

Drugs & Compounds for PIR56447 Gene

No Compound Related Data Available

Transcripts for PIR56447 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56447 Gene

No ASD Table

Relevant External Links for PIR56447 Gene

GeneLoc Exon Structure for
PIR56447

No data available for mRNA/cDNA for PIR56447 Gene

Expression for PIR56447 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56447 Gene

Orthologs for PIR56447 Gene

No data available for Orthologs and Evolution for PIR56447 Gene

Paralogs for PIR56447 Gene

No data available for Paralogs for PIR56447 Gene

Variants for PIR56447 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56447 Gene

Disorders for PIR56447 Gene

No disorders were found for PIR56447 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56447 Gene

Publications for PIR56447 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56447 Gene

Sources for PIR56447 Gene

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