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Aliases for PIR56415 Gene

Subcategory (RNA class) for PIR56415 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR56415 Gene

No Aliases found

ORGUL Members for PIR56415 Gene

Previous GeneCards Identifiers for PIR56415 Gene

  • GC09M127282

No data available for External Ids for PIR56415 Gene

Summaries for PIR56415 Gene

GeneCards Summary for PIR56415 Gene

PIR56415 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56415 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56415 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56415 Gene

Genomics for PIR56415 Gene

GeneHancer (GH) Regulatory Elements for PIR56415 Gene

Promoters and enhancers for PIR56415 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J124519 Enhancer 1 ENCODE dbSUPER 650.7 -1.1 -1085 2.1 ELF3 FOXA2 ARID4B DMAP1 RAD21 RARA CREM THAP11 MIXL1 SP5 PIR56415 PIR44380 LOC100419284 NR6A1
GH09J124523 Enhancer 0.4 ENCODE dbSUPER 0.7 -2.7 -2746 0.1 PIR56415 LOC100419284 NR6A1
GH09J124551 Enhancer 0.9 Ensembl ENCODE 0.3 -32.5 -32457 1.6 CTCF IRF2 MXI1 ARID4B ERF RAD21 CC2D1A NUFIP1 BRD9 STAT2 ENSG00000231149 NR5A1 MIR181A2 MIR181B2 MIR181A2HG PIR56415 LOC100419284 NR6A1
GH09J124592 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -75.3 -75307 5.4 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B DMAP1 YY1 ETS1 RXRA MIR181A2HG PRPS1P2 MIR181A2 MIR181B2 ENSG00000231149 NR5A1 GAPVD1 LOC100419284 PIR56415 NR6A1
GH09J124536 Enhancer 0.6 ENCODE 0.4 -17.5 -17478 0.2 CTCF CEBPB CEBPG ZNF384 REST RAD21 SMC3 ZNF143 ZNF444 DEK ENSG00000231149 NR5A1 PIR56415 LOC100419284 NR6A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56415 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56415 Gene

Genomic Locations for PIR56415 Gene
chr9:124,519,401-124,519,429
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr9:127,281,680-127,281,708
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR56415 Gene

Genes around PIR56415 on UCSC Golden Path with GeneCards custom track

PIR56415 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56415 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56415 Gene

Function for PIR56415 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56415 Gene

Localization for PIR56415 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56415 Gene

Pathways & Interactions for PIR56415 Gene

SuperPathways for PIR56415 Gene

No Data Available

Interacting Proteins for PIR56415 Gene

Gene Ontology (GO) - Biological Process for PIR56415 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56415 Gene

Drugs & Compounds for PIR56415 Gene

No Compound Related Data Available

Transcripts for PIR56415 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56415 Gene

No ASD Table

Relevant External Links for PIR56415 Gene

GeneLoc Exon Structure for
PIR56415

No data available for mRNA/cDNA for PIR56415 Gene

Expression for PIR56415 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56415 Gene

Orthologs for PIR56415 Gene

No data available for Orthologs and Evolution for PIR56415 Gene

Paralogs for PIR56415 Gene

No data available for Paralogs for PIR56415 Gene

Variants for PIR56415 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56415 Gene

Disorders for PIR56415 Gene

No disorders were found for PIR56415 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56415 Gene

Publications for PIR56415 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56415 Gene

Sources for PIR56415 Gene

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