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Aliases for PIR56408 Gene

Subcategory (RNA class) for PIR56408 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR56408 Gene

No Aliases found

ORGUL Members for PIR56408 Gene

Previous GeneCards Identifiers for PIR56408 Gene

  • GC15M051869
  • GC15M052320
  • GC15M053256
  • GC15M053721
  • GC15M054390
  • GC15M052491
  • GC15M053400
  • GC15M054692
  • GC15M055159
  • GC15M055619
  • GC15M056060
  • GC15M056504

No data available for External Ids for PIR56408 Gene

Summaries for PIR56408 Gene

GeneCards Summary for PIR56408 Gene

PIR56408 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56408 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56408 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56408 Gene

Genomics for PIR56408 Gene

GeneHancer (GH) Regulatory Elements for PIR56408 Gene

Promoters and enhancers for PIR56408 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I051303 Enhancer 0.6 ENCODE 550.8 -1.1 -1054 0.2 CLOCK GATAD2B DPF2 ZKSCAN1 FOXA1 CTBP1 ZNF512B GATA3 RCOR1 MYC GC15M057047 GC15M057115 GC15M057120 GC15M057140 GC15M057154 GC15M057170 GC15M057175 GC15M057182 GC15M057186 GC15M057239
GH15I051302 Enhancer 0.3 FANTOM5 550.8 -0.3 -349 0.4 GC15M057041 GC15M057047 GC15M057093 GC15M057115 GC15M057120 GC15M057140 GC15M057154 GC15M057170 GC15M057175 GC15M057180
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56408 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56408 Gene

Genomic Locations for PIR56408 Gene
chr15:51,302,656-51,302,685
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr15:51,594,853-51,594,882
(GRCh37/hg19)

Genomic View for PIR56408 Gene

Genes around PIR56408 on UCSC Golden Path with GeneCards custom track

PIR56408 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56408 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56408 Gene

Proteins for PIR56408 Gene

Post-translational modifications for PIR56408 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56408 Gene

Domains & Families for PIR56408 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56408 Gene

Function for PIR56408 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56408 Gene

Localization for PIR56408 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56408 Gene

Pathways & Interactions for PIR56408 Gene

SuperPathways for PIR56408 Gene

No Data Available

Interacting Proteins for PIR56408 Gene

Gene Ontology (GO) - Biological Process for PIR56408 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56408 Gene

Drugs & Compounds for PIR56408 Gene

No Compound Related Data Available

Transcripts for PIR56408 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56408 Gene

No ASD Table

Relevant External Links for PIR56408 Gene

GeneLoc Exon Structure for
PIR56408

No data available for mRNA/cDNA for PIR56408 Gene

Expression for PIR56408 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56408 Gene

Orthologs for PIR56408 Gene

No data available for Orthologs and Evolution for PIR56408 Gene

Paralogs for PIR56408 Gene

No data available for Paralogs for PIR56408 Gene

Variants for PIR56408 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56408 Gene

Disorders for PIR56408 Gene

No disorders were found for PIR56408 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56408 Gene

Publications for PIR56408 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56408 Gene

Sources for PIR56408 Gene

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