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Aliases for PIR56392 Gene

Subcategory (RNA class) for PIR56392 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR56392 Gene

No Aliases found

ORGUL Members for PIR56392 Gene

No data available for External Ids for PIR56392 Gene

Summaries for PIR56392 Gene

GeneCards Summary for PIR56392 Gene

PIR56392 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56392 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56392 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56392 Gene

Genomics for PIR56392 Gene

GeneHancer (GH) Regulatory Elements for PIR56392 Gene

Promoters and enhancers for PIR56392 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I003517 Enhancer 0.7 FANTOM5 550.8 +2.0 1961 0.1 STAT1 JUN CEBPB CBFA2T3 EP300 RAD21 JUND POLR2A ZNF629 STAT3 PIR56392 RIPK1 GC06M003534
GH06I003511 Enhancer 1.1 FANTOM5 ENCODE 0.8 -2.7 -2728 0.3 PKNOX1 ATF1 ARNT ZSCAN4 MZF1 SIN3A GLI4 ZBTB7B RAD21 ZNF366 PRPF4B RIPK1 PSMG4 WRNIP1 ENSG00000272320 PIR56392 GC06P003478
GH06I003516 Enhancer 1 Ensembl ENCODE 0.8 +4.0 3959 2.8 KLF17 DNMT3B FOS RCOR1 SMARCC1 SP5 CEBPB SMARCB1 TGIF2 MAFF PIR56392 GC06M003534
GH06I003500 Enhancer 0.8 ENCODE 0.4 -13.5 -13526 1 MZF1 FEZF1 ZNF2 ZNF213 ZNF366 FOS ZNF202 ZNF362 OVOL3 CEBPB PRPF4B PSMG4 C6orf201 PIR56392 GC06P003478
GH06I003526 Enhancer 0.5 ENCODE 0.4 +12.6 12600 1.2 MEIS2 SCRT2 CEBPB ZBTB40 PIR56392 GC06M003534
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56392 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56392 Gene

Genomic Locations for PIR56392 Gene
chr6:3,514,360-3,514,388
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr6:3,514,594-3,514,622
(GRCh37/hg19)

Genomic View for PIR56392 Gene

Genes around PIR56392 on UCSC Golden Path with GeneCards custom track

PIR56392 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56392 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56392 Gene

Proteins for PIR56392 Gene

Post-translational modifications for PIR56392 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56392 Gene

Domains & Families for PIR56392 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56392 Gene

Function for PIR56392 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56392 Gene

Localization for PIR56392 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56392 Gene

Pathways & Interactions for PIR56392 Gene

SuperPathways for PIR56392 Gene

No Data Available

Interacting Proteins for PIR56392 Gene

Gene Ontology (GO) - Biological Process for PIR56392 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56392 Gene

Drugs & Compounds for PIR56392 Gene

No Compound Related Data Available

Transcripts for PIR56392 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56392 Gene

No ASD Table

Relevant External Links for PIR56392 Gene

GeneLoc Exon Structure for
PIR56392

No data available for mRNA/cDNA for PIR56392 Gene

Expression for PIR56392 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56392 Gene

Orthologs for PIR56392 Gene

No data available for Orthologs and Evolution for PIR56392 Gene

Paralogs for PIR56392 Gene

No data available for Paralogs for PIR56392 Gene

Variants for PIR56392 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56392 Gene

Disorders for PIR56392 Gene

No disorders were found for PIR56392 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56392 Gene

Publications for PIR56392 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56392 Gene

Sources for PIR56392 Gene

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