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Aliases for PIR56383 Gene

Subcategory (RNA class) for PIR56383 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR56383 Gene

No Aliases found

ORGUL Members for PIR56383 Gene

Previous GeneCards Identifiers for PIR56383 Gene

  • GC19M010764
  • GC19M010766
  • GC19M010769
  • GC19M010772
  • GC19M010776

No data available for External Ids for PIR56383 Gene

Summaries for PIR56383 Gene

GeneCards Summary for PIR56383 Gene

PIR56383 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56383 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56383 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56383 Gene

Genomics for PIR56383 Gene

GeneHancer (GH) Regulatory Elements for PIR56383 Gene

Promoters and enhancers for PIR56383 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J010651 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 -1.1 -1140 5.3 MTA3 ZFX SP1 ELF3 MNT SIX5 CBFA2T2 ZNF148 NKRF POLR2A ILF3 ILF3-DT GC19M010665 PIR39434 PIR56383 ZNF627 LOC100419831 KRI1 FBXL12 DNMT1
GH19J010601 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +49.1 49131 4.5 CC2D1A ZFX ZNF148 NKRF ZNF121 GTF2F1 ZNF687 ZNF24 ZBTB7A YY1 SLC44A2 CDKN2D KRI1 ICAM3 ILF3 ZNF627 PRKCSH TYK2 DNM2 S1PR5
GH19J010624 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +27.3 27314 3.1 ZNF473 SP1 ZNF121 ZBTB7A SP7 POLR2A GLIS2 ZBTB8A PRDM10 ZIC2 SLC44A2 ELOF1 ILF3-DT DNMT1 PIR56383
GH19J010646 Enhancer 0.8 Ensembl 0.7 +4.8 4787 4.4 ZNF121 PRDM1 EGR1 SMARCA4 CREB1 PKNOX1 IKZF1 ATF1 ATF7 ZNF629 SLC44A2 CDKN2D KRI1 ILF3-DT ATG4D PIR56383
GH19J010640 Promoter/Enhancer 1.1 Ensembl dbSUPER 0.4 +13.2 13187 0.8 IKZF2 ZEB2 RCOR2 ZEB1 SAP130 HDGF NBN JUNB BATF ATF2 ILF3-DT SLC44A2 PIR56383
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR56383 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56383 Gene

Genomic Locations for PIR56383 Gene
chr19:10,653,162-10,653,188
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr19:10,763,838-10,763,864
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR56383 Gene

Genes around PIR56383 on UCSC Golden Path with GeneCards custom track

PIR56383 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56383 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56383 Gene

Proteins for PIR56383 Gene

Post-translational modifications for PIR56383 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56383 Gene

Domains & Families for PIR56383 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56383 Gene

Function for PIR56383 Gene

Phenotypes From GWAS Catalog for PIR56383 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56383 Gene

Localization for PIR56383 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56383 Gene

Pathways & Interactions for PIR56383 Gene

PathCards logo

SuperPathways for PIR56383 Gene

No Data Available

Interacting Proteins for PIR56383 Gene

Gene Ontology (GO) - Biological Process for PIR56383 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56383 Gene

Drugs & Compounds for PIR56383 Gene

No Compound Related Data Available

Transcripts for PIR56383 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56383 Gene

No ASD Table

Relevant External Links for PIR56383 Gene

GeneLoc Exon Structure for
PIR56383

No data available for mRNA/cDNA for PIR56383 Gene

Expression for PIR56383 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56383 Gene

Orthologs for PIR56383 Gene

No data available for Orthologs and Evolution for PIR56383 Gene

Paralogs for PIR56383 Gene

No data available for Paralogs for PIR56383 Gene

Variants for PIR56383 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56383 Gene

Disorders for PIR56383 Gene

No disorders were found for PIR56383 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56383 Gene

Publications for PIR56383 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR56383 Gene

Products for PIR56383 Gene

Sources for PIR56383 Gene

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