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Aliases for PIR56350 Gene

Subcategory (RNA class) for PIR56350 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR56350 Gene

No Aliases found

ORGUL Members for PIR56350 Gene

Previous GeneCards Identifiers for PIR56350 Gene

  • GC15P086292
  • GC15P086297
  • GC15P086300
  • GC15P085758
  • GC15P085760
  • GC15P085762
  • GC15P085764
  • GC15P085766
  • GC15P085768

No data available for External Ids for PIR56350 Gene

Summaries for PIR56350 Gene

GeneCards Summary for PIR56350 Gene

PIR56350 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56350 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56350 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56350 Gene

Genomics for PIR56350 Gene

GeneHancer (GH) Regulatory Elements for PIR56350 Gene

Promoters and enhancers for PIR56350 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I085746 Enhancer 0.3 dbSUPER 550.8 -1.3 -1296 1.8 POLR2A GC15P085773 PIR47481 PIR55185 PIR56350 LOC101929679 ENSG00000259407 ENSG00000259762 AKAP13
GH15I085748 Enhancer 1 Ensembl ENCODE dbSUPER 0.8 +2.4 2359 4.9 CTCF RXRA MAX SIN3A REST ZIC2 RAD21 POLR2A POU5F1 HNF4A ENSG00000259407 PIR55258 PIR43740 ENSG00000259276 ENSG00000259762 LOC101929679 GC15P085773 PIR56350 GC15M085845 AKAP13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56350 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56350 Gene

Genomic Locations for PIR56350 Gene
chr15:85,748,343-85,748,370
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr15:86,291,574-86,291,601
(GRCh37/hg19)

Genomic View for PIR56350 Gene

Genes around PIR56350 on UCSC Golden Path with GeneCards custom track

PIR56350 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56350 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56350 Gene

Proteins for PIR56350 Gene

Post-translational modifications for PIR56350 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56350 Gene

Domains & Families for PIR56350 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56350 Gene

Function for PIR56350 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56350 Gene

Localization for PIR56350 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56350 Gene

Pathways & Interactions for PIR56350 Gene

SuperPathways for PIR56350 Gene

No Data Available

Interacting Proteins for PIR56350 Gene

Gene Ontology (GO) - Biological Process for PIR56350 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56350 Gene

Drugs & Compounds for PIR56350 Gene

No Compound Related Data Available

Transcripts for PIR56350 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56350 Gene

No ASD Table

Relevant External Links for PIR56350 Gene

GeneLoc Exon Structure for
PIR56350

No data available for mRNA/cDNA for PIR56350 Gene

Expression for PIR56350 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56350 Gene

Orthologs for PIR56350 Gene

No data available for Orthologs and Evolution for PIR56350 Gene

Paralogs for PIR56350 Gene

No data available for Paralogs for PIR56350 Gene

Variants for PIR56350 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56350 Gene

Disorders for PIR56350 Gene

No disorders were found for PIR56350 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56350 Gene

Publications for PIR56350 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56350 Gene

Sources for PIR56350 Gene

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