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Aliases for PIR56301 Gene

Subcategory (RNA class) for PIR56301 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR56301 Gene

No Aliases found

Previous GeneCards Identifiers for PIR56301 Gene

  • GC17M077007
  • GC17M077019
  • GC17M079001
  • GC17M079035
  • GC17M079045
  • GC17M079055
  • GC17M079067
  • GC17M079076
  • GC17M079085

No data available for External Ids for PIR56301 Gene

Summaries for PIR56301 Gene

GeneCards Summary for PIR56301 Gene

PIR56301 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56301 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR56301

Additional gene information for PIR56301 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56301 Gene

Genomics for PIR56301 Gene

GeneHancer (GH) Regulatory Elements for PIR56301 Gene

Promoters and enhancers for PIR56301 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I078995 Enhancer 0.8 ENCODE dbSUPER 550.8 +1.8 1777 2.2 NCOA3 ESRRA ELF1 ZNF217 GATA3 CTBP1 TARDBP EGR2 GC17M079090 GC17M079095 GC17M079104 PIR56301 PIR52059 PIR47743 CANT1 BIRC5 GC17M079108 PIR40001
GH17I078997 Enhancer 0.8 ENCODE dbSUPER 550.8 -0.8 -787 1.7 CTCF ZNF362 RFX1 ZNF189 ZMYM3 ZNF664 ZFP36 ZBTB33 ZNF600 ZFX GC17M079090 GC17M079095 GC17M079104 GC17M079109 PIR56301 PIR52059 PIR47743 CANT1 C1QTNF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56301 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56301 Gene

Genomic Locations for PIR56301 Gene
chr17:78,997,844-78,997,875
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR56301 Gene

Genes around PIR56301 on UCSC Golden Path with GeneCards custom track

PIR56301 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56301 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR56301 Gene

ORGUL Member Location for PIR56301 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56301 Gene

Proteins for PIR56301 Gene

Post-translational modifications for PIR56301 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56301 Gene

Domains & Families for PIR56301 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56301 Gene

Function for PIR56301 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56301 Gene

Localization for PIR56301 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56301 Gene

Pathways & Interactions for PIR56301 Gene

SuperPathways for PIR56301 Gene

No Data Available

Interacting Proteins for PIR56301 Gene

Gene Ontology (GO) - Biological Process for PIR56301 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56301 Gene

Drugs & Compounds for PIR56301 Gene

No Compound Related Data Available

Transcripts for PIR56301 Gene

fRNAdb Secondary structures for PIR56301 Gene

  • FR083013
  • FR393487

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56301 Gene

No ASD Table

Relevant External Links for PIR56301 Gene

GeneLoc Exon Structure for
PIR56301

No data available for mRNA/cDNA for PIR56301 Gene

Expression for PIR56301 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56301 Gene

Orthologs for PIR56301 Gene

No data available for Orthologs and Evolution for PIR56301 Gene

Paralogs for PIR56301 Gene

No data available for Paralogs for PIR56301 Gene

Variants for PIR56301 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56301 Gene

Disorders for PIR56301 Gene

No disorders were found for PIR56301 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56301 Gene

Publications for PIR56301 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56301 Gene

Sources for PIR56301 Gene

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