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Aliases for PIR56294 Gene

Subcategory (RNA class) for PIR56294 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR56294 Gene

No Aliases found

ORGUL Members for PIR56294 Gene

Previous GeneCards Identifiers for PIR56294 Gene

  • GC02M067731

No data available for External Ids for PIR56294 Gene

Summaries for PIR56294 Gene

GeneCards Summary for PIR56294 Gene

PIR56294 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR56294 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR56294 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR56294 Gene

Genomics for PIR56294 Gene

GeneHancer (GH) Regulatory Elements for PIR56294 Gene

Promoters and enhancers for PIR56294 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I067502 Enhancer 0.7 Ensembl ENCODE 550.8 +1.7 1664 2.1 FOXA2 RXRA JUN CEBPB FOS HNF4A SPI1 PIR56294 ETAA1 GC02M067411
GH02I067462 Enhancer 1.3 UCNEbase ENCODE 0.3 +40.9 40945 2.5 PKNOX1 ARNT INSM2 KLF17 FEZF1 RAD21 BRCA1 ZNF213 ZNF366 SCRT2 ETAA1 PIR56294 GC02M067411
GH02I067517 Enhancer 0.9 FANTOM5 ENCODE 0.4 -12.7 -12664 0.8 GFI1B ZEB2 ZNF843 ATF2 OSR2 GLI2 GLIS1 ZNF629 ZSCAN5C CREB1 PIR56294 LOC102724373
GH02I067560 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -56.6 -56610 2.3 PKNOX1 SIN3A FEZF1 BRCA1 TCF12 ATF7 FOS DEK REST TSHZ1 LOC102724373 LOC105374786 PIR56294
GH02I067514 Enhancer 0.6 ENCODE 0.4 -10.2 -10161 1.8 SMARCE1 ZNF362 ZBTB6 DPF2 ZNF217 CTBP1 PRDM6 GATA3 JUND ZNF629 PIR56294 LOC102724373
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR56294 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR56294 Gene

Genomic Locations for PIR56294 Gene
chr2:67,504,777-67,504,804
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr2:67,731,909-67,731,936
(GRCh37/hg19)

Genomic View for PIR56294 Gene

Genes around PIR56294 on UCSC Golden Path with GeneCards custom track

PIR56294 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR56294 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR56294 Gene

Proteins for PIR56294 Gene

Post-translational modifications for PIR56294 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR56294 Gene

Domains & Families for PIR56294 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR56294 Gene

Function for PIR56294 Gene

Phenotypes From GWAS Catalog for PIR56294 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR56294 Gene

Localization for PIR56294 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR56294 Gene

Pathways & Interactions for PIR56294 Gene

SuperPathways for PIR56294 Gene

No Data Available

Interacting Proteins for PIR56294 Gene

Gene Ontology (GO) - Biological Process for PIR56294 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR56294 Gene

Drugs & Compounds for PIR56294 Gene

No Compound Related Data Available

Transcripts for PIR56294 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR56294 Gene

No ASD Table

Relevant External Links for PIR56294 Gene

GeneLoc Exon Structure for
PIR56294

No data available for mRNA/cDNA for PIR56294 Gene

Expression for PIR56294 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR56294 Gene

Orthologs for PIR56294 Gene

No data available for Orthologs and Evolution for PIR56294 Gene

Paralogs for PIR56294 Gene

No data available for Paralogs for PIR56294 Gene

Variants for PIR56294 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR56294 Gene

Disorders for PIR56294 Gene

No disorders were found for PIR56294 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR56294 Gene

Publications for PIR56294 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR56294 Gene

Sources for PIR56294 Gene

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