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Aliases for PIR55282 Gene

Subcategory (RNA class) for PIR55282 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR55282 Gene

No Aliases found

ORGUL Members for PIR55282 Gene

Previous GeneCards Identifiers for PIR55282 Gene

  • GC09M100853
  • GC09M100872
  • GC09M100914
  • GC09M100933
  • GC09M100960
  • GC09M098091
  • GC09M098110
  • GC09M098131
  • GC09M098149
  • GC09M098166
  • GC09M098187
  • GC09M098197

No data available for External Ids for PIR55282 Gene

Summaries for PIR55282 Gene

GeneCards Summary for PIR55282 Gene

PIR55282 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR55282 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR55282

Additional gene information for PIR55282 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR55282 Gene

Genomics for PIR55282 Gene

GeneHancer (GH) Regulatory Elements for PIR55282 Gene

Promoters and enhancers for PIR55282 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I098087 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -0.6 -621 1 RING1 POLR2A MAX EZH2 GC09M098223 GC09M098237 GC09M098238 GC09M098241 GC09M098242 GC09M098243 GC09M098245 GC09M098246 GC09M098247 GC09M098248
GH09I098086 Enhancer 0.7 ENCODE dbSUPER 550.8 +0.8 844 0.2 USF1 RFX1 ZNF10 MAX SIN3A EBF1 BMI1 GC09M098223 GC09M098237 GC09M098238 GC09M098239 GC09M098240 GC09M098241 GC09M098242 GC09M098243 GC09M098244 GC09M098245
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR55282 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR55282 Gene

Genomic Locations for PIR55282 Gene
chr9:98,086,968-98,086,998
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr9:100,849,250-100,849,280
(GRCh37/hg19)

Genomic View for PIR55282 Gene

Genes around PIR55282 on UCSC Golden Path with GeneCards custom track

PIR55282 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR55282 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR55282 Gene

ORGUL Member Location for PIR55282 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR55282 Gene

Proteins for PIR55282 Gene

Post-translational modifications for PIR55282 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR55282 Gene

Domains & Families for PIR55282 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR55282 Gene

Function for PIR55282 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR55282 Gene

Localization for PIR55282 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR55282 Gene

Pathways & Interactions for PIR55282 Gene

SuperPathways for PIR55282 Gene

No Data Available

Interacting Proteins for PIR55282 Gene

Gene Ontology (GO) - Biological Process for PIR55282 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR55282 Gene

Drugs & Compounds for PIR55282 Gene

No Compound Related Data Available

Transcripts for PIR55282 Gene

fRNAdb Secondary structures for PIR55282 Gene

  • FR369187

Alternative Splicing Database (ASD) splice patterns (SP) for PIR55282 Gene

No ASD Table

Relevant External Links for PIR55282 Gene

GeneLoc Exon Structure for
PIR55282

No data available for mRNA/cDNA for PIR55282 Gene

Expression for PIR55282 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR55282 Gene

Orthologs for PIR55282 Gene

No data available for Orthologs and Evolution for PIR55282 Gene

Paralogs for PIR55282 Gene

No data available for Paralogs for PIR55282 Gene

Variants for PIR55282 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR55282 Gene

Disorders for PIR55282 Gene

No disorders were found for PIR55282 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR55282 Gene

Publications for PIR55282 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR55282 Gene

Sources for PIR55282 Gene

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