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Aliases for PIR55136 Gene

Subcategory (RNA class) for PIR55136 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR55136 Gene

No Aliases found

ORGUL Members for PIR55136 Gene

Previous GeneCards Identifiers for PIR55136 Gene

  • GC19P042584

No data available for External Ids for PIR55136 Gene

Summaries for PIR55136 Gene

GeneCards Summary for PIR55136 Gene

PIR55136 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR55136 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR55136 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR55136 Gene

Genomics for PIR55136 Gene

GeneHancer (GH) Regulatory Elements for PIR55136 Gene

Promoters and enhancers for PIR55136 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I042081 Enhancer 0.6 ENCODE 550.8 +1.8 1754 0.7 CTCF ZNF654 REST ZEB2 RAD21 ZNF324 ZSCAN21 ZNF664 MTA3 POLR2A PIR55136 LOC100505622
GH19I042078 Enhancer 0.5 ENCODE 550.8 -1.5 -1475 0.2 ZFHX2 ZBTB6 ARID4B KLF9 ZNF600 EGR2 PIR55136 GRIK5 ZNF574
GH19I042074 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.8 -3.7 -3684 3.8 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ZNF574 ZNF526 HNRNPUL1 CCDC97 MEGF8 RPS19 ARHGEF1 TMEM145 LOC732229 GRIK5
GH19I042127 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +50.7 50712 6 HDGF PKNOX1 ARID4B SIN3A IRF4 ZNF48 GLIS2 ARID2 ZNF207 ZNF143 POU2F2 LOC100505622 GRIK5 MEGF8 DEDD2 ARHGEF1 MIR4323 PIR55136
GH19I042090 Enhancer 1 Ensembl ENCODE 0.4 +11.5 11520 2.3 KLF17 SIN3A RAD21 ZSCAN5C SCRT2 RUNX3 ZNF654 YY2 REST NR2F2 GRIK5 ATP1A3 PIR55136 LOC100505622 POU2F2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR55136 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR55136 Gene

Genomic Locations for PIR55136 Gene
chr19:42,080,199-42,080,227
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr19:42,584,351-42,584,379
(GRCh37/hg19)

Genomic View for PIR55136 Gene

Genes around PIR55136 on UCSC Golden Path with GeneCards custom track

PIR55136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR55136 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR55136 Gene

Proteins for PIR55136 Gene

Post-translational modifications for PIR55136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR55136 Gene

Domains & Families for PIR55136 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR55136 Gene

Function for PIR55136 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR55136 Gene

Localization for PIR55136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR55136 Gene

Pathways & Interactions for PIR55136 Gene

SuperPathways for PIR55136 Gene

No Data Available

Interacting Proteins for PIR55136 Gene

Gene Ontology (GO) - Biological Process for PIR55136 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR55136 Gene

Drugs & Compounds for PIR55136 Gene

No Compound Related Data Available

Transcripts for PIR55136 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR55136 Gene

No ASD Table

Relevant External Links for PIR55136 Gene

GeneLoc Exon Structure for
PIR55136

No data available for mRNA/cDNA for PIR55136 Gene

Expression for PIR55136 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR55136 Gene

Orthologs for PIR55136 Gene

No data available for Orthologs and Evolution for PIR55136 Gene

Paralogs for PIR55136 Gene

No data available for Paralogs for PIR55136 Gene

Variants for PIR55136 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR55136 Gene

Disorders for PIR55136 Gene

No disorders were found for PIR55136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR55136 Gene

Publications for PIR55136 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR55136 Gene

Sources for PIR55136 Gene

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