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Aliases for PIR54907 Gene

Subcategory (RNA class) for PIR54907 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR54907 Gene

No Aliases found

ORGUL Members for PIR54907 Gene

Previous GeneCards Identifiers for PIR54907 Gene

  • GC06M034011
  • GC06M034349
  • GC06M035018
  • GC06M035360
  • GC06M035880
  • GC06M034675
  • GC06M036030
  • GC06M036446
  • GC06M036801
  • GC06M037154
  • GC06M037506
  • GC06M037868
  • GC06M038256

No data available for External Ids for PIR54907 Gene

Summaries for PIR54907 Gene

GeneCards Summary for PIR54907 Gene

PIR54907 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR54907 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR54907

Additional gene information for PIR54907 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR54907 Gene

Genomics for PIR54907 Gene

GeneHancer (GH) Regulatory Elements for PIR54907 Gene

Promoters and enhancers for PIR54907 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033908 Enhancer 0.7 ENCODE 650.7 0.0 -44 0.2 FOXA2 TAF1 MAX RAD21 RARA YY1 EGR1 HNF4G MIXL1 RXRA GC06M038838 GC06P042279 GC06P042430 GC06P042431 GC06P042435 GC06P042439 GC06P042443 GC06P042452 GC06P042470 GC06P042474
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR54907 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR54907 Gene

Genomic Locations for PIR54907 Gene
chr6:33,908,043-33,908,075
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand
chr6:33,875,820-33,875,852
(GRCh37/hg19)
Size:
33 bases
Orientation:
Minus strand

Genomic View for PIR54907 Gene

Genes around PIR54907 on UCSC Golden Path with GeneCards custom track

PIR54907 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR54907 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR54907 Gene

ORGUL Member Location for PIR54907 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR54907 Gene

Function for PIR54907 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR54907 Gene

Localization for PIR54907 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR54907 Gene

Pathways & Interactions for PIR54907 Gene

SuperPathways for PIR54907 Gene

No Data Available

Interacting Proteins for PIR54907 Gene

Gene Ontology (GO) - Biological Process for PIR54907 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR54907 Gene

Drugs & Compounds for PIR54907 Gene

No Compound Related Data Available

Transcripts for PIR54907 Gene

fRNAdb Secondary structures for PIR54907 Gene

  • FR282517

Alternative Splicing Database (ASD) splice patterns (SP) for PIR54907 Gene

No ASD Table

Relevant External Links for PIR54907 Gene

GeneLoc Exon Structure for
PIR54907

No data available for mRNA/cDNA for PIR54907 Gene

Expression for PIR54907 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR54907 Gene

Orthologs for PIR54907 Gene

No data available for Orthologs and Evolution for PIR54907 Gene

Paralogs for PIR54907 Gene

No data available for Paralogs for PIR54907 Gene

Variants for PIR54907 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR54907 Gene

Disorders for PIR54907 Gene

No disorders were found for PIR54907 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR54907 Gene

Publications for PIR54907 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR54907 Gene

Sources for PIR54907 Gene

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