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Aliases for PIR54573 Gene

Subcategory (RNA class) for PIR54573 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR54573 Gene

No Aliases found

ORGUL Members for PIR54573 Gene

Previous GeneCards Identifiers for PIR54573 Gene

  • GC22P024651
  • GC22P024670
  • GC22P024694
  • GC22P021777
  • GC22P021802

No data available for External Ids for PIR54573 Gene

Summaries for PIR54573 Gene

GeneCards Summary for PIR54573 Gene

PIR54573 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR54573 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR54573 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR54573 Gene

Genomics for PIR54573 Gene

GeneHancer (GH) Regulatory Elements for PIR54573 Gene

Promoters and enhancers for PIR54573 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I037273 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.4 -399 2.1 HDGF ATF1 BATF IRF4 ZNF121 EGR1 FOS BCLAF1 IKZF2 RUNX3 GC22P037275 PIR54573 GGA1 NCF4 LGALS2 CYTH4 CSF2RB SH3BP1 RAC2
GH22I037271 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.9 -2857 1 JUND ZFP36 GGA1 LGALS2 CYTH4 CSF2RB NCF4 RAC2 SH3BP1 GC22P037275 PIR54573
GH22I037266 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.0 -6997 1.8 CTCF USF1 BACH1 ZIC2 RAD21 ZNF335 GLIS2 MTA3 ZNF547 VEZF1 MFNG RAC2 NCF4 GC22P037275 PIR54573
GH22I037259 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.0 -15039 1 HDAC1 PKNOX1 RAD21 GATA2 ZNF143 IKZF2 CREM SMARCA5 SMAD5 ZBTB2 CYTH4 IL2RB ELFN2 ENSG00000243902 ENSG00000229971 ENSG00000226233 GC22P037275 PIR54573 RAC2
GH22I037260 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -13.5 -13538 0.5 HDGF CTCF RB1 RAD21 GLIS2 SMC3 ZNF143 IKZF2 RUNX3 SMARCA5 CYTH4 ENSG00000235237 IL2RB GC22P037275 PIR54573 RAC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR54573 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR54573 Gene

Genomic Locations for PIR54573 Gene
chr22:37,274,557-37,274,587
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr22:21,638,016-21,638,054
(GRCh37/hg19)

Genomic View for PIR54573 Gene

Genes around PIR54573 on UCSC Golden Path with GeneCards custom track

PIR54573 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR54573 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR54573 Gene

Proteins for PIR54573 Gene

Post-translational modifications for PIR54573 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR54573 Gene

Domains & Families for PIR54573 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR54573 Gene

Function for PIR54573 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR54573 Gene

Localization for PIR54573 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR54573 Gene

Pathways & Interactions for PIR54573 Gene

SuperPathways for PIR54573 Gene

No Data Available

Interacting Proteins for PIR54573 Gene

Gene Ontology (GO) - Biological Process for PIR54573 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR54573 Gene

Drugs & Compounds for PIR54573 Gene

No Compound Related Data Available

Transcripts for PIR54573 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR54573 Gene

No ASD Table

Relevant External Links for PIR54573 Gene

GeneLoc Exon Structure for
PIR54573

No data available for mRNA/cDNA for PIR54573 Gene

Expression for PIR54573 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR54573 Gene

Orthologs for PIR54573 Gene

No data available for Orthologs and Evolution for PIR54573 Gene

Paralogs for PIR54573 Gene

No data available for Paralogs for PIR54573 Gene

Variants for PIR54573 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR54573 Gene

Disorders for PIR54573 Gene

No disorders were found for PIR54573 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR54573 Gene

Publications for PIR54573 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR54573 Gene

Sources for PIR54573 Gene

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