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Aliases for PIR54152 Gene

Subcategory (RNA class) for PIR54152 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR54152 Gene

No Aliases found

ORGUL Members for PIR54152 Gene

Previous GeneCards Identifiers for PIR54152 Gene

  • GC19P009949

No data available for External Ids for PIR54152 Gene

Summaries for PIR54152 Gene

GeneCards Summary for PIR54152 Gene

PIR54152 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR54152 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR54152 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR54152 Gene

Genomics for PIR54152 Gene

GeneHancer (GH) Regulatory Elements for PIR54152 Gene

Promoters and enhancers for PIR54152 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J009834 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.7 -3.1 -3140 2.4 ZFX ELF3 SP1 CC2D1A NKRF POLR2A ZNF121 CSDE1 ZSCAN21 FOS ENSG00000267289 PIN1 LOC100996288 KRI1 ILF3 EIF3G FBXL12 PPAN DNMT1 ZNF426
GH19J009857 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +19.4 19424 2.3 CBFA2T2 MTA1 ZEB2 ZNF740 NR2C1 CTBP1 ZEB1 BCL11A NR2C2 NR2F1 ZNF266 PIR54152 GC19P009927 OLFM2
GH19J009846 Enhancer 1 Ensembl ENCODE 0.4 +8.6 8610 1.8 CTCF MYC ZBTB7A SP7 CREB1 GLIS2 GMEB1 ZNF600 ZIC2 REST ENSG00000267289 ZNF266 PIR54152 PIN1 GC19P009927
GH19J009862 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +24.5 24542 1.9 ZNF16 ILF3 PPAN KRI1 ZNF266 ZNF561 ZNF426 ZNF846 ZNF699 FBXL12 LOC100419831
GH19J009913 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE 0.2 +75.4 75386 2.7 ZFX ZNF148 ZNF384 MAFK NCOA6 ZBTB7A TRIM24 KLF14 EGR1 ZNF560 OLFM2 RDH8 COL5A3 ENSG00000267273 ZNF266 GC19P009927 PIR54152
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR54152 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR54152 Gene

Genomic Locations for PIR54152 Gene
chr19:9,838,541-9,838,567
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr19:9,949,217-9,949,243
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR54152 Gene

Genes around PIR54152 on UCSC Golden Path with GeneCards custom track

PIR54152 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR54152 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR54152 Gene

Proteins for PIR54152 Gene

Post-translational modifications for PIR54152 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR54152 Gene

Domains & Families for PIR54152 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR54152 Gene

Function for PIR54152 Gene

Phenotypes From GWAS Catalog for PIR54152 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR54152 Gene

Localization for PIR54152 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR54152 Gene

Pathways & Interactions for PIR54152 Gene

PathCards logo

SuperPathways for PIR54152 Gene

No Data Available

Interacting Proteins for PIR54152 Gene

Gene Ontology (GO) - Biological Process for PIR54152 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR54152 Gene

Drugs & Compounds for PIR54152 Gene

No Compound Related Data Available

Transcripts for PIR54152 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR54152 Gene

No ASD Table

Relevant External Links for PIR54152 Gene

GeneLoc Exon Structure for
PIR54152

No data available for mRNA/cDNA for PIR54152 Gene

Expression for PIR54152 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR54152 Gene

Orthologs for PIR54152 Gene

No data available for Orthologs and Evolution for PIR54152 Gene

Paralogs for PIR54152 Gene

No data available for Paralogs for PIR54152 Gene

Variants for PIR54152 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR54152 Gene

Disorders for PIR54152 Gene

No disorders were found for PIR54152 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR54152 Gene

Publications for PIR54152 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR54152 Gene

Products for PIR54152 Gene

Sources for PIR54152 Gene

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