Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR54129 Gene

Subcategory (RNA class) for PIR54129 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR54129 Gene

No Aliases found

ORGUL Members for PIR54129 Gene

Previous GeneCards Identifiers for PIR54129 Gene

  • GC19M018418
  • GC19M036421
  • GC19M036701
  • GC19M039003
  • GC19M036885
  • GC19M036903
  • GC19M037415
  • GC19M037744
  • GC19M038043
  • GC19M038337
  • GC19M038632
  • GC19M038873

No data available for External Ids for PIR54129 Gene

Summaries for PIR54129 Gene

GeneCards Summary for PIR54129 Gene

PIR54129 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR54129 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR54129 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR54129 Gene

Genomics for PIR54129 Gene

GeneHancer (GH) Regulatory Elements for PIR54129 Gene

Promoters and enhancers for PIR54129 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J036330 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 +13.6 13621 2.9 ZNF473 SP1 ZNF687 FOS MYC YY1 SP7 ZNF174 GLIS2 POLR2A LINC00665 ZNF383 ZNF567 ZNF345 KMT2B HAUS5 TMEM147-AS1 ZNF829 RBM42 ZNF875
GH19J036376 Enhancer 0.2 Ensembl 0.3 -31.1 -31106 0.2 ENSG00000266973 ZFP14 GC19M040689 PIR54129
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR54129 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR54129 Gene

Genomic Locations for PIR54129 Gene
chr19:36,345,364-36,345,395
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr19:18,418,133-18,418,164
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR54129 Gene

Genes around PIR54129 on UCSC Golden Path with GeneCards custom track

PIR54129 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR54129 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR54129 Gene

Proteins for PIR54129 Gene

Post-translational modifications for PIR54129 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR54129 Gene

Domains & Families for PIR54129 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR54129 Gene

Function for PIR54129 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR54129 Gene

Localization for PIR54129 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR54129 Gene

Pathways & Interactions for PIR54129 Gene

PathCards logo

SuperPathways for PIR54129 Gene

No Data Available

Interacting Proteins for PIR54129 Gene

Gene Ontology (GO) - Biological Process for PIR54129 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR54129 Gene

Drugs & Compounds for PIR54129 Gene

No Compound Related Data Available

Transcripts for PIR54129 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR54129 Gene

No ASD Table

Relevant External Links for PIR54129 Gene

GeneLoc Exon Structure for
PIR54129

No data available for mRNA/cDNA for PIR54129 Gene

Expression for PIR54129 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR54129 Gene

Orthologs for PIR54129 Gene

No data available for Orthologs and Evolution for PIR54129 Gene

Paralogs for PIR54129 Gene

No data available for Paralogs for PIR54129 Gene

Variants for PIR54129 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR54129 Gene

Disorders for PIR54129 Gene

No disorders were found for PIR54129 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR54129 Gene

Publications for PIR54129 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR54129 Gene

Products for PIR54129 Gene

Sources for PIR54129 Gene

Content
Loading form....