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Aliases for PIR54039 Gene

Subcategory (RNA class) for PIR54039 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR54039 Gene

No Aliases found

ORGUL Members for PIR54039 Gene

Previous GeneCards Identifiers for PIR54039 Gene

  • GC15M051638
  • GC15M052058
  • GC15M052993
  • GC15M053460
  • GC15M054105
  • GC15M051349
  • GC15M052631
  • GC15M053993
  • GC15M054831
  • GC15M055308
  • GC15M055766
  • GC15M056198
  • GC15M056646

No data available for External Ids for PIR54039 Gene

Summaries for PIR54039 Gene

GeneCards Summary for PIR54039 Gene

PIR54039 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR54039 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR54039

Additional gene information for PIR54039 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR54039 Gene

Genomics for PIR54039 Gene

GeneHancer (GH) Regulatory Elements for PIR54039 Gene

Promoters and enhancers for PIR54039 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J051299 Enhancer 0.8 ENCODE 650.7 +1.7 1708 1.5 FOXA2 MLX ARID4B RAD21 SLC30A9 THAP11 HMG20B SP5 NFIL3 RAD51 GC15M057483 GC15M057484 GC15M057497 GC15M057508 GC15M057511 GC15M057515 GC15M057516 GC15M057535 GC15M057548 GC15M057565
GH15J051302 Enhancer 0.3 FANTOM5 650.7 -1.9 -1877 0.4 GC15M057481 GC15M057487 GC15M057535 GC15M057561 GC15M057567 GC15M057589 GC15M057602 GC15M057621 GC15M057626 GC15M057630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR54039 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR54039 Gene

Genomic Locations for PIR54039 Gene
chr15:51,301,127-51,301,157
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr15:51,593,324-51,593,354
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR54039 Gene

Genes around PIR54039 on UCSC Golden Path with GeneCards custom track

PIR54039 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR54039 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR54039 Gene

ORGUL Member Location for PIR54039 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR54039 Gene

Function for PIR54039 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR54039 Gene

Localization for PIR54039 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR54039 Gene

Pathways & Interactions for PIR54039 Gene

SuperPathways for PIR54039 Gene

No Data Available

Interacting Proteins for PIR54039 Gene

Gene Ontology (GO) - Biological Process for PIR54039 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR54039 Gene

Drugs & Compounds for PIR54039 Gene

No Compound Related Data Available

Transcripts for PIR54039 Gene

fRNAdb Secondary structures for PIR54039 Gene

  • FR278910

Alternative Splicing Database (ASD) splice patterns (SP) for PIR54039 Gene

No ASD Table

Relevant External Links for PIR54039 Gene

GeneLoc Exon Structure for
PIR54039

No data available for mRNA/cDNA for PIR54039 Gene

Expression for PIR54039 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR54039 Gene

Orthologs for PIR54039 Gene

No data available for Orthologs and Evolution for PIR54039 Gene

Paralogs for PIR54039 Gene

No data available for Paralogs for PIR54039 Gene

Variants for PIR54039 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR54039 Gene

Disorders for PIR54039 Gene

No disorders were found for PIR54039 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR54039 Gene

Publications for PIR54039 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR54039 Gene

Sources for PIR54039 Gene

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