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Aliases for PIR53943 Gene

Subcategory (RNA class) for PIR53943 Gene


Quality Score for this RNA gene is


Aliases for PIR53943 Gene

No Aliases found

ORGUL Members for PIR53943 Gene

Previous GeneCards Identifiers for PIR53943 Gene

  • GC04M078695

No data available for External Ids for PIR53943 Gene

Summaries for PIR53943 Gene

GeneCards Summary for PIR53943 Gene

PIR53943 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53943 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53943 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53943 Gene

Genomics for PIR53943 Gene

GeneHancer (GH) Regulatory Elements for PIR53943 Gene

Promoters and enhancers for PIR53943 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J077773 Enhancer 0.2 Ensembl 600.7 +1.2 1164 0.4 PIR53943 GC04M077723 CNOT6L
GH04J077776 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -8.9 -8936 14.2 ELF3 ZNF121 ZNF384 TRIM24 SP7 PRDM1 MZF1 ZNF680 PRDM10 CEBPA CNOT6L FRAS1 PIR53943
GH04J077734 Promoter/Enhancer 1.3 Ensembl ENCODE 0.3 +39.1 39145 1.8 ZNF652 ZFX CBFA2T2 MLLT1 ZNF644 SMARCA4 IKZF1 DPF2 LEF1 HDAC1 CNOT6L FRAS1 GC04M077723 PIR53943
GH04J077771 Enhancer 0.4 Ensembl 0.7 +2.8 2763 1.2 NANOG POU5F1 CNOT6L FRAS1 PIR53943 GC04M077723
GH04J077797 Enhancer 0.5 dbSUPER 0.3 -23.9 -23898 2 CEBPG CEBPA CEBPB FOS MAX ZMYM3 TEAD3 CNOT6L PIR53943
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR53943 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53943 Gene

Genomic Locations for PIR53943 Gene
27 bases
Minus strand
27 bases
Minus strand

Genomic View for PIR53943 Gene

Genes around PIR53943 on UCSC Golden Path with GeneCards custom track

PIR53943 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53943 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53943 Gene

Proteins for PIR53943 Gene

Post-translational modifications for PIR53943 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53943 Gene

Domains & Families for PIR53943 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53943 Gene

Function for PIR53943 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53943 Gene

Localization for PIR53943 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53943 Gene

Pathways & Interactions for PIR53943 Gene

PathCards logo

SuperPathways for PIR53943 Gene

No Data Available

Interacting Proteins for PIR53943 Gene

Gene Ontology (GO) - Biological Process for PIR53943 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR53943 Gene

Drugs & Compounds for PIR53943 Gene

No Compound Related Data Available

Transcripts for PIR53943 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53943 Gene

No ASD Table

Relevant External Links for PIR53943 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR53943 Gene

Expression for PIR53943 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53943 Gene

Orthologs for PIR53943 Gene

No data available for Orthologs and Evolution for PIR53943 Gene

Paralogs for PIR53943 Gene

No data available for Paralogs for PIR53943 Gene

Variants for PIR53943 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53943 Gene

Disorders for PIR53943 Gene

No disorders were found for PIR53943 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53943 Gene

Publications for PIR53943 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR53943 Gene

Products for PIR53943 Gene

Sources for PIR53943 Gene

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