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Aliases for PIR53800 Gene

Subcategory (RNA class) for PIR53800 Gene


Quality Score for this RNA gene is


Aliases for PIR53800 Gene

No Aliases found

ORGUL Members for PIR53800 Gene

Previous GeneCards Identifiers for PIR53800 Gene

  • GC19M020023
  • GC19M020345
  • GC19M020604
  • GC19M020812
  • GC19M021209
  • GC19M039264
  • GC19M039325
  • GC19M039389
  • GC19M039447
  • GC19M039505
  • GC19M039555
  • GC19M039602
  • GC19M039650

No data available for External Ids for PIR53800 Gene

Summaries for PIR53800 Gene

GeneCards Summary for PIR53800 Gene

PIR53800 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53800 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53800 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53800 Gene

Genomics for PIR53800 Gene

GeneHancer (GH) Regulatory Elements for PIR53800 Gene

Promoters and enhancers for PIR53800 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J039237 Enhancer 1 Ensembl ENCODE 650.7 -1.6 -1628 0.9 CLOCK ZNF493 KLF17 KLF14 ZNF121 GLIS2 EGR1 ZNF416 KLF7 EGR2 IFNL3P1 PIR59372 PIR51750 PIR60511 PIR53800 GC19M039790 GC19M039788 ZNF780B PAK4 FBXO17
GH19J039236 Enhancer 0.2 ENCODE 650.7 -0.6 -583 0.2 IFNL3P1 GC19M039677 GC19M039771 GC19M039783 PIR38924 PIR57565 PIR50171 PIR51750 PIR53800 PAK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR53800 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53800 Gene

Genomic Locations for PIR53800 Gene
30 bases
Minus strand
30 bases
Minus strand

Genomic View for PIR53800 Gene

Genes around PIR53800 on UCSC Golden Path with GeneCards custom track

PIR53800 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53800 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53800 Gene

Function for PIR53800 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53800 Gene

Localization for PIR53800 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53800 Gene

Pathways & Interactions for PIR53800 Gene

SuperPathways for PIR53800 Gene

No Data Available

Interacting Proteins for PIR53800 Gene

Gene Ontology (GO) - Biological Process for PIR53800 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR53800 Gene

Drugs & Compounds for PIR53800 Gene

No Compound Related Data Available

Transcripts for PIR53800 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53800 Gene

No ASD Table

Relevant External Links for PIR53800 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR53800 Gene

Expression for PIR53800 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53800 Gene

Orthologs for PIR53800 Gene

No data available for Orthologs and Evolution for PIR53800 Gene

Paralogs for PIR53800 Gene

No data available for Paralogs for PIR53800 Gene

Variants for PIR53800 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53800 Gene

Disorders for PIR53800 Gene

No disorders were found for PIR53800 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53800 Gene

Publications for PIR53800 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53800 Gene

Sources for PIR53800 Gene

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