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Aliases for PIR53570 Gene

Subcategory (RNA class) for PIR53570 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR53570 Gene

No Aliases found

Previous GeneCards Identifiers for PIR53570 Gene

  • GC09P113156
  • GC09P113279
  • GC09P113404
  • GC09P113540
  • GC09P113668
  • GC09P113804
  • GC09P113928
  • GC09P114056
  • GC09P114190
  • GC09P114291

No data available for External Ids for PIR53570 Gene

Summaries for PIR53570 Gene

GeneCards Summary for PIR53570 Gene

PIR53570 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53570 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR53570

Additional gene information for PIR53570 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53570 Gene

Genomics for PIR53570 Gene

GeneHancer (GH) Regulatory Elements for PIR53570 Gene

Promoters and enhancers for PIR53570 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J113116 Enhancer 0.2 Ensembl 600.7 -0.5 -511 1.2 GC09P114839 GC09P114840 GC09P114841 GC09P114842 GC09P114843 GC09P114844 GC09P114846 GC09P114847 GC09P114848 GC09P114849
GH09J113118 Enhancer 0.2 Ensembl 600.7 +1.6 1589 1.4 GC09P114840 GC09P114841 GC09P114843 GC09P114849 GC09P114851 GC09P114932 GC09P114935 GC09P114940 GC09P114942 GC09P114944
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR53570 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53570 Gene

Genomic Locations for PIR53570 Gene
chr9:113,117,112-113,117,163
(GRCh38/hg38)
Size:
52 bases
Orientation:
Plus strand

Genomic View for PIR53570 Gene

Genes around PIR53570 on UCSC Golden Path with GeneCards custom track

PIR53570 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53570 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR53570 Gene

ORGUL Member Location for PIR53570 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53570 Gene

Proteins for PIR53570 Gene

Post-translational modifications for PIR53570 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53570 Gene

Domains & Families for PIR53570 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53570 Gene

Function for PIR53570 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53570 Gene

Localization for PIR53570 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53570 Gene

Pathways & Interactions for PIR53570 Gene

PathCards logo

SuperPathways for PIR53570 Gene

No Data Available

Interacting Proteins for PIR53570 Gene

Gene Ontology (GO) - Biological Process for PIR53570 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR53570 Gene

Drugs & Compounds for PIR53570 Gene

No Compound Related Data Available

Transcripts for PIR53570 Gene

fRNAdb Secondary structures for PIR53570 Gene

  • FR013676
  • FR201099
  • FR043992
  • FR160865
  • FR109782

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53570 Gene

No ASD Table

Relevant External Links for PIR53570 Gene

GeneLoc Exon Structure for
PIR53570

No data available for mRNA/cDNA for PIR53570 Gene

Expression for PIR53570 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53570 Gene

Orthologs for PIR53570 Gene

No data available for Orthologs and Evolution for PIR53570 Gene

Paralogs for PIR53570 Gene

No data available for Paralogs for PIR53570 Gene

Variants for PIR53570 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53570 Gene

Disorders for PIR53570 Gene

No disorders were found for PIR53570 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53570 Gene

Publications for PIR53570 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR53570 Gene

Products for PIR53570 Gene

Sources for PIR53570 Gene

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