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Aliases for PIR53480 Gene

Subcategory (RNA class) for PIR53480 Gene


Quality Score for this RNA gene is


Aliases for PIR53480 Gene

No Aliases found

ORGUL Members for PIR53480 Gene

Previous GeneCards Identifiers for PIR53480 Gene

  • GC12P011803

No data available for External Ids for PIR53480 Gene

Summaries for PIR53480 Gene

GeneCards Summary for PIR53480 Gene

PIR53480 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53480 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53480 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53480 Gene

Genomics for PIR53480 Gene

GeneHancer (GH) Regulatory Elements for PIR53480 Gene

Promoters and enhancers for PIR53480 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I011648 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.9 2915 11.8 HDGF PKNOX1 FOXA2 SMAD1 ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2 ETV6 TAS2R19 BCL2L14 PIR53480 GC12M012107
GH12I011663 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +14.4 14407 4.9 GATA3 ELF1 PIR53480 ETV6 GC12M012107
GH12I011667 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +17.6 17581 1.4 GATA3 ZNF366 CEBPG ETV6 PIR53480 GC12M012107
GH12I011716 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +67.6 67576 4.3 PKNOX1 SMAD1 FEZF1 BATF KLF5 IRF4 RAD21 ZSCAN5C ATF7 RCOR1 ETV6 BCL2L14 GC12M012107 PIR53480
GH12I011711 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +60.9 60935 0.8 ELF3 SOX13 FOXA2 SAP130 RARA NR2F6 CREM GATAD2A SOX5 TEAD1 ETV6 RNU7-60P LINC01252 BCL2L14 PIR53480 GC12M012107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR53480 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53480 Gene

Genomic Locations for PIR53480 Gene
27 bases
Plus strand

Genomic View for PIR53480 Gene

Genes around PIR53480 on UCSC Golden Path with GeneCards custom track

PIR53480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53480 Gene

Proteins for PIR53480 Gene

Post-translational modifications for PIR53480 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53480 Gene

Domains & Families for PIR53480 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53480 Gene

Function for PIR53480 Gene

Phenotypes From GWAS Catalog for PIR53480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53480 Gene

Localization for PIR53480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53480 Gene

Pathways & Interactions for PIR53480 Gene

SuperPathways for PIR53480 Gene

No Data Available

Interacting Proteins for PIR53480 Gene

Gene Ontology (GO) - Biological Process for PIR53480 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR53480 Gene

Drugs & Compounds for PIR53480 Gene

No Compound Related Data Available

Transcripts for PIR53480 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53480 Gene

No ASD Table

Relevant External Links for PIR53480 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR53480 Gene

Expression for PIR53480 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53480 Gene

Orthologs for PIR53480 Gene

No data available for Orthologs and Evolution for PIR53480 Gene

Paralogs for PIR53480 Gene

No data available for Paralogs for PIR53480 Gene

Variants for PIR53480 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53480 Gene

Disorders for PIR53480 Gene

No disorders were found for PIR53480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53480 Gene

Publications for PIR53480 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53480 Gene

Sources for PIR53480 Gene

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