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Aliases for PIR53321 Gene

Subcategory (RNA class) for PIR53321 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR53321 Gene

No Aliases found

ORGUL Members for PIR53321 Gene

Previous GeneCards Identifiers for PIR53321 Gene

  • GC06M033985
  • GC06M034202
  • GC06M034890
  • GC06M035229
  • GC06M035724
  • GC06M034537
  • GC06M035557
  • GC06M036271
  • GC06M036644
  • GC06M036998
  • GC06M037349
  • GC06M037701
  • GC06M038051

No data available for External Ids for PIR53321 Gene

Summaries for PIR53321 Gene

GeneCards Summary for PIR53321 Gene

PIR53321 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53321 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53321 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53321 Gene

Genomics for PIR53321 Gene

GeneHancer (GH) Regulatory Elements for PIR53321 Gene

Promoters and enhancers for PIR53321 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J034027 Enhancer 1 ENCODE dbSUPER 0.4 -11.2 -11216 0.2 RB1 ZNF48 RAD21 ARID2 ZNF143 SMARCA5 ZNF654 REST ZNF217 MYNN PIR53321 GRM4
GH06J034055 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -40.0 -39983 1.3 BCOR HDAC1 CTCF MEIS2 KLF1 PTBP1 ZMYM3 CTBP1 ATF7 PRDM10 LEMD2 PIR53321 GRM4
GH06J034006 Enhancer 0.7 ENCODE dbSUPER 0.4 +10.2 10184 0.2 NANOG POLR2A POU5F1 ZNF24 PIR57291 GRM4 MLN LEMD2 IP6K3 PIR53321
GH06J034032 Enhancer 0.6 dbSUPER 0.4 -16.4 -16394 1.5 ZNF282 NFIB MNT ZIC2 GLIS2 NFIC GLIS1 IKZF1 NBN KDM1A PIR53321 GRM4
GH06J034020 Enhancer 0.6 dbSUPER 0.4 -5.9 -5889 3.6 ZNF639 ZNF664 TCF12 ARHGAP35 IKZF1 NRF1 CBFA2T3 ATF7 ATF2 TRIM28 PIR53321 GRM4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR53321 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53321 Gene

Genomic Locations for PIR53321 Gene
chr6:34,016,576-34,016,603
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr6:33,984,353-33,984,380
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR53321 Gene

Genes around PIR53321 on UCSC Golden Path with GeneCards custom track

PIR53321 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53321 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53321 Gene

Function for PIR53321 Gene

Phenotypes From GWAS Catalog for PIR53321 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53321 Gene

Localization for PIR53321 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53321 Gene

Pathways & Interactions for PIR53321 Gene

SuperPathways for PIR53321 Gene

No Data Available

Interacting Proteins for PIR53321 Gene

Gene Ontology (GO) - Biological Process for PIR53321 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR53321 Gene

Drugs & Compounds for PIR53321 Gene

No Compound Related Data Available

Transcripts for PIR53321 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53321 Gene

No ASD Table

Relevant External Links for PIR53321 Gene

GeneLoc Exon Structure for
PIR53321

No data available for mRNA/cDNA for PIR53321 Gene

Expression for PIR53321 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53321 Gene

Orthologs for PIR53321 Gene

No data available for Orthologs and Evolution for PIR53321 Gene

Paralogs for PIR53321 Gene

No data available for Paralogs for PIR53321 Gene

Variants for PIR53321 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53321 Gene

Disorders for PIR53321 Gene

No disorders were found for PIR53321 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53321 Gene

Publications for PIR53321 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53321 Gene

Sources for PIR53321 Gene

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