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Aliases for PIR53318 Gene

Subcategory (RNA class) for PIR53318 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR53318 Gene

No Aliases found

ORGUL Members for PIR53318 Gene

Previous GeneCards Identifiers for PIR53318 Gene

  • GC03M105392

No data available for External Ids for PIR53318 Gene

Summaries for PIR53318 Gene

GeneCards Summary for PIR53318 Gene

PIR53318 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53318 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53318 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53318 Gene

Genomics for PIR53318 Gene

GeneHancer (GH) Regulatory Elements for PIR53318 Gene

Promoters and enhancers for PIR53318 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J105647 Enhancer 0.9 Ensembl ENCODE 0.3 +27.0 26971 0.4 SMARCA4 CEBPG ZNF362 ATF3 SP1 CEBPB JUN JUND FOS FOSL1 PIR53318 GC03P105504
GH03J105686 Enhancer 0.6 ENCODE 0.4 -12.3 -12340 0.2 ZNF362 ZNF384 RAD21 CTCF TRIM22 RFX5 SMC3 ZNF654 PIR53318 GC03P105721 CBLB
GH03J105612 Enhancer 0.9 ENCODE 0.2 +60.3 60296 2.4 DACH1 CBFA2T2 SPI1 SIRT6 MLLT1 TEAD4 SMARCA4 TRIM24 MTA1 IKZF1 ALCAM PIR53318 GC03P105504
GH03J105597 Enhancer 0.7 FANTOM5 ENCODE 0.2 +75.3 75286 2.6 POLR2A JUN JUND FOS PIR53318 GC03P105504
GH03J105611 Enhancer 0.6 ENCODE 0.2 +62.4 62380 0.2 SMARCE1 GATA3 TCF7L2 ZNF217 CTBP1 SOX6 DPF2 NFIB CUX1 GATAD2B PIR53318 GC03P105504
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR53318 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53318 Gene

Genomic Locations for PIR53318 Gene
chr3:105,674,145-105,674,172
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr3:105,392,989-105,393,016
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR53318 Gene

Genes around PIR53318 on UCSC Golden Path with GeneCards custom track

PIR53318 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53318 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53318 Gene

Proteins for PIR53318 Gene

Post-translational modifications for PIR53318 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53318 Gene

Domains & Families for PIR53318 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53318 Gene

Function for PIR53318 Gene

Animal Model Products

miRNA for PIR53318 Gene

miRTarBase miRNAs that target PIR53318

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for PIR53318 Gene

Localization for PIR53318 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53318 Gene

Pathways & Interactions for PIR53318 Gene

SuperPathways for PIR53318 Gene

No Data Available

Interacting Proteins for PIR53318 Gene

Gene Ontology (GO) - Biological Process for PIR53318 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR53318 Gene

Drugs & Compounds for PIR53318 Gene

No Compound Related Data Available

Transcripts for PIR53318 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53318 Gene

No ASD Table

Relevant External Links for PIR53318 Gene

GeneLoc Exon Structure for
PIR53318

No data available for mRNA/cDNA for PIR53318 Gene

Expression for PIR53318 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53318 Gene

Orthologs for PIR53318 Gene

No data available for Orthologs and Evolution for PIR53318 Gene

Paralogs for PIR53318 Gene

No data available for Paralogs for PIR53318 Gene

Variants for PIR53318 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53318 Gene

Disorders for PIR53318 Gene

No disorders were found for PIR53318 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53318 Gene

Publications for PIR53318 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53318 Gene

Sources for PIR53318 Gene

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