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Aliases for PIR53142 Gene

Subcategory (RNA class) for PIR53142 Gene


Quality Score for this RNA gene is


Aliases for PIR53142 Gene

No Aliases found

ORGUL Members for PIR53142 Gene

Previous GeneCards Identifiers for PIR53142 Gene

  • GC01M037813

No data available for External Ids for PIR53142 Gene

Summaries for PIR53142 Gene

GeneCards Summary for PIR53142 Gene

PIR53142 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53142 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53142 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53142 Gene

Genomics for PIR53142 Gene

GeneHancer (GH) Regulatory Elements for PIR53142 Gene

Promoters and enhancers for PIR53142 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I037391 Enhancer 0.6 ENCODE 0.3 -43.1 -43120 0.8 CTCF ZNF189 REST ZIC2 ZNF148 GATA3 GATA2 POLR2A ZNF341 GLIS1 PIR53142 GC01M037470
GH01I037363 Enhancer 0.4 ENCODE 0.4 -14.9 -14903 0.1 RCOR1 CHD2 PIR53142 GC01M037470
GH01I037454 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.1 -106.9 -106915 1.7 PKNOX1 ATF1 ARNT ARID4B SIN3A ZNF2 BRCA1 E2F8 ELK1 ARID2 LINC01137 GC01M037470 PIR53142
GH01I037395 Enhancer 0.6 ENCODE 0.2 -47.0 -47023 0.2 CTCF MEIS2 PKNOX1 ZNF335 SP1 SCRT2 NFE2 ZSCAN29 PIR53142 GC01M037470
GH01I037464 Enhancer 1 Ensembl ENCODE dbSUPER 0.1 -117.2 -117217 2.5 MAFG ZNF316 GATA3 MAFF ZNF580 FOS EMSY MAFK LINC01137 GC01M037470 PIR53142
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR53142 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53142 Gene

Genomic Locations for PIR53142 Gene
27 bases
Minus strand

Genomic View for PIR53142 Gene

Genes around PIR53142 on UCSC Golden Path with GeneCards custom track

PIR53142 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53142 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53142 Gene

Proteins for PIR53142 Gene

Post-translational modifications for PIR53142 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53142 Gene

Domains & Families for PIR53142 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53142 Gene

Function for PIR53142 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53142 Gene

Localization for PIR53142 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53142 Gene

Pathways & Interactions for PIR53142 Gene

SuperPathways for PIR53142 Gene

No Data Available

Interacting Proteins for PIR53142 Gene

Gene Ontology (GO) - Biological Process for PIR53142 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR53142 Gene

Drugs & Compounds for PIR53142 Gene

No Compound Related Data Available

Transcripts for PIR53142 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53142 Gene

No ASD Table

Relevant External Links for PIR53142 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR53142 Gene

Expression for PIR53142 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53142 Gene

Orthologs for PIR53142 Gene

No data available for Orthologs and Evolution for PIR53142 Gene

Paralogs for PIR53142 Gene

No data available for Paralogs for PIR53142 Gene

Variants for PIR53142 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53142 Gene

Disorders for PIR53142 Gene

No disorders were found for PIR53142 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53142 Gene

Publications for PIR53142 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR53142 Gene

Sources for PIR53142 Gene

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