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Aliases for PIR53050 Gene

Subcategory (RNA class) for PIR53050 Gene


Quality Score for this RNA gene is


Aliases for PIR53050 Gene

No Aliases found

ORGUL Members for PIR53050 Gene

No data available for External Ids for PIR53050 Gene

Summaries for PIR53050 Gene

GeneCards Summary for PIR53050 Gene

PIR53050 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR53050 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR53050 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR53050 Gene

Genomics for PIR53050 Gene

GeneHancer (GH) Regulatory Elements for PIR53050 Gene

Promoters and enhancers for PIR53050 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J003852 Enhancer 1 Ensembl ENCODE 600.7 +1.6 1573 0.3 ZNF121 ZSCAN21 CTCF MAFK KLF14 EGR1 ZNF600 PRDM10 ZIC2 REST PIR53050 ATCAY EEF2 ZFR2 GC19P003837
GH19J003855 Promoter 1 Ensembl 600.7 -1.0 -966 0.4 ELF3 KAT8 HDAC1 GABPA IRF2 FOXK2 KMT2B TGIF2 ZKSCAN8 ZNF318 PIR53050 ATCAY EEF2 ZFR2
GH19J003867 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.4 -14.2 -14201 1.3 SP1 POLR2A SP2 MGA USF1 ZBTB33 L3MBTL2 ZFR2 PIR53050
GH19J003857 Enhancer 0.6 ENCODE 0.7 -3.4 -3393 0.1 CREM RFX1 SCRT2 RFX3 SCRT1 BMI1 RFX5 RFXANK CEBPB ATCAY EEF2 PIR53050 ZFR2
GH19J003849 Enhancer 0.9 Ensembl ENCODE 0.4 +5.1 5115 0.6 CC2D1A CTCF RAD21 REST SCRT2 MAZ GATAD2A DEK SMC3 SKIL ATCAY MIR637 DAPK3 EEF2 PIR53050 GC19P003837 ZFR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR53050 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR53050 Gene

Genomic Locations for PIR53050 Gene
27 bases
Minus strand
27 bases
Minus strand

Genomic View for PIR53050 Gene

Genes around PIR53050 on UCSC Golden Path with GeneCards custom track

PIR53050 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR53050 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR53050 Gene

Proteins for PIR53050 Gene

Post-translational modifications for PIR53050 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR53050 Gene

Domains & Families for PIR53050 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR53050 Gene

Function for PIR53050 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR53050 Gene

Localization for PIR53050 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR53050 Gene

Pathways & Interactions for PIR53050 Gene

PathCards logo

SuperPathways for PIR53050 Gene

No Data Available

Interacting Proteins for PIR53050 Gene

Gene Ontology (GO) - Biological Process for PIR53050 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR53050 Gene

Drugs & Compounds for PIR53050 Gene

No Compound Related Data Available

Transcripts for PIR53050 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR53050 Gene

No ASD Table

Relevant External Links for PIR53050 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR53050 Gene

Expression for PIR53050 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR53050 Gene

Orthologs for PIR53050 Gene

No data available for Orthologs and Evolution for PIR53050 Gene

Paralogs for PIR53050 Gene

No data available for Paralogs for PIR53050 Gene

Variants for PIR53050 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR53050 Gene

Disorders for PIR53050 Gene

No disorders were found for PIR53050 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR53050 Gene

Publications for PIR53050 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR53050 Gene

Products for PIR53050 Gene

Sources for PIR53050 Gene

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