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Aliases for PIR52074 Gene

Subcategory (RNA class) for PIR52074 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR52074 Gene

No Aliases found

ORGUL Members for PIR52074 Gene

No data available for External Ids for PIR52074 Gene

Summaries for PIR52074 Gene

GeneCards Summary for PIR52074 Gene

PIR52074 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR52074 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR52074 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR52074 Gene

Genomics for PIR52074 Gene

GeneHancer (GH) Regulatory Elements for PIR52074 Gene

Promoters and enhancers for PIR52074 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015601 Enhancer 1.1 VISTA UCNEbase Ensembl ENCODE 0.7 +2.5 2504 2.2 ZNF341 PIR52074 GC11P015625 ENSG00000254789 LOC105376568 GC11M015430 LINC02751
GH11J015577 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 -21.5 -21478 7.2 CBFA2T2 MLLT1 CEBPG BACH1 SP1 SMARCA4 REST HDAC1 FOXA2 NR2C1 INSC ENSG00000253072 ENSG00000254789 LINC02751 PIR52074 LOC105376568 GC11M015430
GH11J015621 Promoter/Enhancer 1 Ensembl ENCODE 0.3 +21.5 21481 2.3 POLR2A RXRA SP1 EZH2 NR2F2 RCOR1 GC11P015625 LOC105376568 LOC102724957 ENSG00000254789 GC11M015430 PIR52074
GH11J015613 Enhancer 0.6 Ensembl 0.4 +13.0 13022 0.2 PKNOX1 ZIC2 ZXDB OSR2 WT1 GATA3 ZNF335 JUND FEZF1 GLIS1 GC11P015625 ENSG00000254789 PIR52074 LOC105376568 GC11M015430
GH11J015615 Enhancer 0.5 Ensembl 0.4 +14.9 14922 0.4 NCOA3 CTBP1 ESRRA GATA3 JUND GC11P015625 LOC105376568 ENSG00000254789 PIR52074 GC11M015430
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR52074 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR52074 Gene

Genomic Locations for PIR52074 Gene
chr11:15,600,479-15,600,506
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr11:15,622,025-15,622,052
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR52074 Gene

Genes around PIR52074 on UCSC Golden Path with GeneCards custom track

PIR52074 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR52074 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR52074 Gene

Proteins for PIR52074 Gene

Post-translational modifications for PIR52074 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR52074 Gene

Domains & Families for PIR52074 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR52074 Gene

Function for PIR52074 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR52074 Gene

Localization for PIR52074 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR52074 Gene

Pathways & Interactions for PIR52074 Gene

PathCards logo

SuperPathways for PIR52074 Gene

No Data Available

Interacting Proteins for PIR52074 Gene

Gene Ontology (GO) - Biological Process for PIR52074 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR52074 Gene

Drugs & Compounds for PIR52074 Gene

No Compound Related Data Available

Transcripts for PIR52074 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR52074 Gene

No ASD Table

Relevant External Links for PIR52074 Gene

GeneLoc Exon Structure for
PIR52074

No data available for mRNA/cDNA for PIR52074 Gene

Expression for PIR52074 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR52074 Gene

Orthologs for PIR52074 Gene

No data available for Orthologs and Evolution for PIR52074 Gene

Paralogs for PIR52074 Gene

No data available for Paralogs for PIR52074 Gene

Variants for PIR52074 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR52074 Gene

Disorders for PIR52074 Gene

No disorders were found for PIR52074 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR52074 Gene

Publications for PIR52074 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR52074 Gene

Products for PIR52074 Gene

Sources for PIR52074 Gene

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