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Aliases for PIR51863 Gene

Subcategory (RNA class) for PIR51863 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR51863 Gene

No Aliases found

ORGUL Members for PIR51863 Gene

Previous GeneCards Identifiers for PIR51863 Gene

  • GC11P086338

No data available for External Ids for PIR51863 Gene

Summaries for PIR51863 Gene

GeneCards Summary for PIR51863 Gene

PIR51863 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51863 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51863 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51863 Gene

Genomics for PIR51863 Gene

GeneHancer (GH) Regulatory Elements for PIR51863 Gene

Promoters and enhancers for PIR51863 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J086632 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.4 8366 7.4 ZSCAN21 CTCF FOSL2 ZNF600 ZIC2 REST SMARCC1 JUN SP1 RCOR1 ME3 PRSS23 PIR51863 GC11M086573
GH11J086669 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.3 +44.6 44579 3.9 ZNF652 NCOA3 SP1 CTCF FOXA2 CEBPB ZFX ATF3 RNF2 MXI1 ME3 PRSS23 PIR51863 GC11M086573
GH11J086622 Enhancer 0.7 Ensembl ENCODE 0.7 -3.4 -3449 3.8 SP7 CEBPG CEBPB GATA3 ATF2 GLIS1 ME3 PRSS23 PIR51863 PIR47350 GC11M086573 ENSG00000254733
GH11J086627 Enhancer 0.6 Ensembl ENCODE 0.7 +2.0 2038 3.6 SP1 RXRA NR2F2 ME3 PIR51863 GC11M086573
GH11J086620 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.4 -6.1 -6145 1.2 ME3 PIR47350 PIR51863 GC11M086573 ENSG00000254733
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51863 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51863 Gene

Genomic Locations for PIR51863 Gene
chr11:86,627,349-86,627,375
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr11:86,338,391-86,338,417
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR51863 Gene

Genes around PIR51863 on UCSC Golden Path with GeneCards custom track

PIR51863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51863 Gene

Proteins for PIR51863 Gene

Post-translational modifications for PIR51863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51863 Gene

Domains & Families for PIR51863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51863 Gene

Function for PIR51863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51863 Gene

Localization for PIR51863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51863 Gene

Pathways & Interactions for PIR51863 Gene

PathCards logo

SuperPathways for PIR51863 Gene

No Data Available

Interacting Proteins for PIR51863 Gene

Gene Ontology (GO) - Biological Process for PIR51863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51863 Gene

Drugs & Compounds for PIR51863 Gene

No Compound Related Data Available

Transcripts for PIR51863 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51863 Gene

No ASD Table

Relevant External Links for PIR51863 Gene

GeneLoc Exon Structure for
PIR51863

No data available for mRNA/cDNA for PIR51863 Gene

Expression for PIR51863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51863 Gene

Orthologs for PIR51863 Gene

No data available for Orthologs and Evolution for PIR51863 Gene

Paralogs for PIR51863 Gene

No data available for Paralogs for PIR51863 Gene

Variants for PIR51863 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51863 Gene

Disorders for PIR51863 Gene

No disorders were found for PIR51863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51863 Gene

Publications for PIR51863 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR51863 Gene

Products for PIR51863 Gene

Sources for PIR51863 Gene

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