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Aliases for PIR51613 Gene

Subcategory (RNA class) for PIR51613 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR51613 Gene

No Aliases found

ORGUL Members for PIR51613 Gene

Previous GeneCards Identifiers for PIR51613 Gene

  • GC19P042966

No data available for External Ids for PIR51613 Gene

Summaries for PIR51613 Gene

GeneCards Summary for PIR51613 Gene

PIR51613 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51613 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51613 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51613 Gene

Genomics for PIR51613 Gene

GeneHancer (GH) Regulatory Elements for PIR51613 Gene

Promoters and enhancers for PIR51613 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I042461 Enhancer 0.4 ENCODE 550.8 -0.2 -230 0.2 SOX5 SOX13 GATAD2A PIR51613 CXCL17 LIPE-AS1
GH19I042460 Enhancer 0.2 FANTOM5 550.8 -1.4 -1419 0.4 PIR51613 CXCL17 CEACAM8 DEDD2 LIPE-AS1
GH19I042465 Enhancer 1 Ensembl ENCODE 0.8 +4.4 4384 2.4 HDGF MEIS2 CTCF BACH1 EBF1 RAD21 IRF4 RELA POLR2A ZNF143 CXCL17 CD177 PIR51613 RNU4-60P LIPE-AS1
GH19I042449 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -11.7 -11745 1.7 PKNOX1 FOXA2 SMAD1 MLX ARNT ARID4B DMAP1 IRF4 YY1 SLC30A9 LIPE RNU4-60P PSG8 CD177 CEACAM1 CXCL17 PIR51613 LIPE-AS1
GH19I042467 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +6.5 6493 1.1 FEZF1 ZNF2 ZNF416 KLF7 FOS TSHZ1 ZNF518A ZNF610 GLIS1 PRDM4 ZNF574 CXCL17 ENSG00000268355 RNU4-60P PIR51613 LIPE-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR51613 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51613 Gene

Genomic Locations for PIR51613 Gene
chr19:42,462,074-42,462,101
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr19:42,966,226-42,966,253
(GRCh37/hg19)

Genomic View for PIR51613 Gene

Genes around PIR51613 on UCSC Golden Path with GeneCards custom track

PIR51613 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51613 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51613 Gene

Proteins for PIR51613 Gene

Post-translational modifications for PIR51613 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51613 Gene

Domains & Families for PIR51613 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51613 Gene

Function for PIR51613 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51613 Gene

Localization for PIR51613 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51613 Gene

Pathways & Interactions for PIR51613 Gene

SuperPathways for PIR51613 Gene

No Data Available

Interacting Proteins for PIR51613 Gene

Gene Ontology (GO) - Biological Process for PIR51613 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51613 Gene

Drugs & Compounds for PIR51613 Gene

No Compound Related Data Available

Transcripts for PIR51613 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51613 Gene

No ASD Table

Relevant External Links for PIR51613 Gene

GeneLoc Exon Structure for
PIR51613

No data available for mRNA/cDNA for PIR51613 Gene

Expression for PIR51613 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51613 Gene

Orthologs for PIR51613 Gene

No data available for Orthologs and Evolution for PIR51613 Gene

Paralogs for PIR51613 Gene

No data available for Paralogs for PIR51613 Gene

Variants for PIR51613 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51613 Gene

Disorders for PIR51613 Gene

No disorders were found for PIR51613 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51613 Gene

Publications for PIR51613 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR51613 Gene

Sources for PIR51613 Gene

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