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Aliases for PIR51508 Gene

Subcategory (RNA class) for PIR51508 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR51508 Gene

No Aliases found

ORGUL Members for PIR51508 Gene

Previous GeneCards Identifiers for PIR51508 Gene

  • GC03M126317

No data available for External Ids for PIR51508 Gene

Summaries for PIR51508 Gene

GeneCards Summary for PIR51508 Gene

PIR51508 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51508 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR51508

Additional gene information for PIR51508 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51508 Gene

Genomics for PIR51508 Gene

GeneHancer (GH) Regulatory Elements for PIR51508 Gene

Promoters and enhancers for PIR51508 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J126582 Promoter 0.6 EPDnew 0.4 +16.2 16195 0.1 POLR2A GC03M126565 GC03M126599 PIR51508 RNA5SP138 LOC105374090 TXNRD3NB
GH03J126573 Enhancer 0.5 Ensembl 0.3 +24.9 24919 0.6 ZNF639 MEIS2 MAZ L3MBTL2 NRF1 PRDM10 MGA CHST13 GC03M126565 RNA5SP138 LOC105374090 PIR51508 GC03M126599 TXNRD3NB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51508 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51508 Gene

Genomic Locations for PIR51508 Gene
chr3:126,598,590-126,598,620
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr3:126,317,433-126,317,463
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR51508 Gene

Genes around PIR51508 on UCSC Golden Path with GeneCards custom track

PIR51508 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51508 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR51508 Gene

ORGUL Member Location for PIR51508 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51508 Gene

Function for PIR51508 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51508 Gene

Localization for PIR51508 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51508 Gene

Pathways & Interactions for PIR51508 Gene

SuperPathways for PIR51508 Gene

No Data Available

Interacting Proteins for PIR51508 Gene

Gene Ontology (GO) - Biological Process for PIR51508 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51508 Gene

Drugs & Compounds for PIR51508 Gene

No Compound Related Data Available

Transcripts for PIR51508 Gene

fRNAdb Secondary structures for PIR51508 Gene

  • FR059569

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51508 Gene

No ASD Table

Relevant External Links for PIR51508 Gene

GeneLoc Exon Structure for
PIR51508

No data available for mRNA/cDNA for PIR51508 Gene

Expression for PIR51508 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51508 Gene

Orthologs for PIR51508 Gene

No data available for Orthologs and Evolution for PIR51508 Gene

Paralogs for PIR51508 Gene

No data available for Paralogs for PIR51508 Gene

Variants for PIR51508 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51508 Gene

Disorders for PIR51508 Gene

No disorders were found for PIR51508 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51508 Gene

Publications for PIR51508 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR51508 Gene

Sources for PIR51508 Gene

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