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Aliases for PIR51450 Gene

Subcategory (RNA class) for PIR51450 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR51450 Gene

No Aliases found

ORGUL Members for PIR51450 Gene

Previous GeneCards Identifiers for PIR51450 Gene

  • GC10P077910

No data available for External Ids for PIR51450 Gene

Summaries for PIR51450 Gene

GeneCards Summary for PIR51450 Gene

PIR51450 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51450 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51450 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51450 Gene

Genomics for PIR51450 Gene

GeneHancer (GH) Regulatory Elements for PIR51450 Gene

Promoters and enhancers for PIR51450 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J076149 Enhancer 0.9 ENCODE 600.7 -0.4 -424 2.5 ZNF652 SP1 ELF3 MNT POLR2A RERE HNF1A SP5 KAT8 HMG20B PIR51450 ZNF503 GC10M076108 GC10P075984 LRMDA
GH10J076114 Enhancer 1.2 UCNEbase ENCODE 0.3 -36.3 -36289 1 ZNF384 ZBTB7A YY1 SP7 POLR2A PKNOX1 ZNF488 LEF1 ZSCAN4 ZEB2 PIR51450 GC10M076108 GC10P075984 LRMDA
GH10J076033 Promoter/Enhancer 2.6 VISTA UCNEbase FANTOM5 Ensembl ENCODE 0.1 -115.1 -115148 5 CTCF ELF3 MNT POLR2A CEBPG RERE ZNF384 ZSCAN21 AHR ZNF24 LRMDA ZNF503 ZNF503-AS2 ENSG00000236842 RNU6-673P GC10P075984 PIR51450
GH10J076102 Enhancer 1.1 Ensembl ENCODE 0.3 -47.2 -47184 2.4 CTCF ELF3 CEBPG TFE3 SP7 PPARG ZNF644 ZNF547 KAT8 FOSL2 PIR51450 GC10P075984 LRMDA
GH10J076085 Enhancer 1.1 Ensembl ENCODE 0.2 -64.3 -64296 2.7 HDGF CTCF SP7 SP1 MZF1 RAD21 POLR2A PKNOX1 RXRA ZBTB8A PIR51450 GC10P075984 LRMDA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51450 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51450 Gene

Genomic Locations for PIR51450 Gene
chr10:76,150,785-76,150,813
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr10:77,910,543-77,910,571
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR51450 Gene

Genes around PIR51450 on UCSC Golden Path with GeneCards custom track

PIR51450 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51450 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51450 Gene

Proteins for PIR51450 Gene

Post-translational modifications for PIR51450 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51450 Gene

Domains & Families for PIR51450 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51450 Gene

Function for PIR51450 Gene

Phenotypes From GWAS Catalog for PIR51450 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51450 Gene

Localization for PIR51450 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51450 Gene

Pathways & Interactions for PIR51450 Gene

PathCards logo

SuperPathways for PIR51450 Gene

No Data Available

Interacting Proteins for PIR51450 Gene

Gene Ontology (GO) - Biological Process for PIR51450 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51450 Gene

Drugs & Compounds for PIR51450 Gene

No Compound Related Data Available

Transcripts for PIR51450 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51450 Gene

No ASD Table

Relevant External Links for PIR51450 Gene

GeneLoc Exon Structure for
PIR51450

No data available for mRNA/cDNA for PIR51450 Gene

Expression for PIR51450 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51450 Gene

Orthologs for PIR51450 Gene

No data available for Orthologs and Evolution for PIR51450 Gene

Paralogs for PIR51450 Gene

No data available for Paralogs for PIR51450 Gene

Variants for PIR51450 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51450 Gene

Disorders for PIR51450 Gene

No disorders were found for PIR51450 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51450 Gene

Publications for PIR51450 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR51450 Gene

Products for PIR51450 Gene

Sources for PIR51450 Gene

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