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Aliases for PIR51426 Gene

Subcategory (RNA class) for PIR51426 Gene

piRNA

Quality Score for this RNA gene is

20

Aliases for PIR51426 Gene

No Aliases found

ORGUL Members for PIR51426 Gene

Previous GeneCards Identifiers for PIR51426 Gene

  • GC11P086297

No data available for External Ids for PIR51426 Gene

Summaries for PIR51426 Gene

GeneCards Summary for PIR51426 Gene

PIR51426 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51426 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51426 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51426 Gene

Genomics for PIR51426 Gene

GeneHancer (GH) Regulatory Elements for PIR51426 Gene

Promoters and enhancers for PIR51426 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J086576 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -8.5 -8460 3.7 ZNF652 TFE3 SP7 SP5 PKNOX1 ZNF488 ZBTB8A PRDM10 ZSCAN4 ZEB2 PRSS23 ME3 PIR51426 GC11P086542 PIR57473 GC11M086573 ENSG00000254733
GH11J086567 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -18.6 -18590 1.1 SP7 KLF14 MZF1 CREB1 PRDM10 ZEB2 ZNF639 ATF7 PATZ1 ZNF629 PRSS23 RN7SL225P PIR51426 PIR57473 GC11P086542 ME3 ENSG00000254733
GH11J086547 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -35.7 -35723 6.2 BACH1 SP7 POLR2A SP1 NFE2 TCF7 CTBP1 MAFG FOXA2 FOXK2 ME3 PRSS23 FZD4 GC11P086542 PIR57473 PIR51426 ENSG00000254733
GH11J086557 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -27.3 -27334 3 MAFK BACH1 MCM2 IKZF1 RFX1 ZNF316 NFE2 PKNOX1 MAFG NR2F2 ME3 PRSS23 GC11P086542 PIR57473 PIR51426 ENSG00000254733
GH11J086575 Enhancer 0.8 Ensembl dbSUPER 0.4 -10.5 -10523 0.2 SREBF1 ZNF629 ZXDB OSR2 KLF8 FOSL2 ZNF366 ZSCAN23 ZNF843 PIR51426 GC11P086542 PIR57473 ME3 ENSG00000254733 GC11M086573
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51426 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51426 Gene

Genomic Locations for PIR51426 Gene
chr11:86,586,423-86,586,451
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr11:86,297,465-86,297,493
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR51426 Gene

Genes around PIR51426 on UCSC Golden Path with GeneCards custom track

PIR51426 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51426 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51426 Gene

Proteins for PIR51426 Gene

Post-translational modifications for PIR51426 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51426 Gene

Domains & Families for PIR51426 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51426 Gene

Function for PIR51426 Gene

Phenotypes From GWAS Catalog for PIR51426 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51426 Gene

Localization for PIR51426 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51426 Gene

Pathways & Interactions for PIR51426 Gene

PathCards logo

SuperPathways for PIR51426 Gene

No Data Available

Interacting Proteins for PIR51426 Gene

Gene Ontology (GO) - Biological Process for PIR51426 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51426 Gene

Drugs & Compounds for PIR51426 Gene

No Compound Related Data Available

Transcripts for PIR51426 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51426 Gene

No ASD Table

Relevant External Links for PIR51426 Gene

GeneLoc Exon Structure for
PIR51426

No data available for mRNA/cDNA for PIR51426 Gene

Expression for PIR51426 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51426 Gene

Orthologs for PIR51426 Gene

No data available for Orthologs and Evolution for PIR51426 Gene

Paralogs for PIR51426 Gene

No data available for Paralogs for PIR51426 Gene

Variants for PIR51426 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51426 Gene

Disorders for PIR51426 Gene

No disorders were found for PIR51426 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51426 Gene

Publications for PIR51426 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR51426 Gene

Products for PIR51426 Gene

Sources for PIR51426 Gene

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