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Aliases for PIR51422 Gene

Subcategory (RNA class) for PIR51422 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR51422 Gene

No Aliases found

ORGUL Members for PIR51422 Gene

Previous GeneCards Identifiers for PIR51422 Gene

  • GC01M021551

No data available for External Ids for PIR51422 Gene

Summaries for PIR51422 Gene

GeneCards Summary for PIR51422 Gene

PIR51422 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51422 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51422 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51422 Gene

Genomics for PIR51422 Gene

GeneHancer (GH) Regulatory Elements for PIR51422 Gene

Promoters and enhancers for PIR51422 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J021257 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -35.6 -35555 6.7 ZKSCAN8 ZNF148 MLLT1 ZNF121 GTF2F1 BACH1 MAFK TRIM24 SP1 EGR1 HP1BP3 EIF4G3 USP48 CDC42-IT1 NBPF3 ENSG00000271428 ECE1 NBPF2P ALPL ENSG00000236936
GH01J021250 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -27.9 -27914 6.4 CC2D1A ELF3 CTCF ZKSCAN8 CEBPG RERE GTF2F1 NCOA3 TFE3 SP1 EIF4G3 ENSG00000236936 PIR51422 ECE1
GH01J021216 Enhancer 0.9 Ensembl ENCODE 0.4 +7.9 7904 1.4 CTCF ZNF121 RAD21 ZIC2 REST PATZ1 SCRT2 CTBP1 OSR2 USF1 PIR51422 GC01M021203 ECE1
GH01J021236 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -13.2 -13207 3.3 EGR1 PKNOX1 DPF2 RUNX3 NR2F1 ZNF664 FOS MAX MNT ENSG00000236936 ECE1 PIR51422
GH01J021232 Enhancer 0.7 FANTOM5 0.4 -6.7 -6746 0.2 CC2D1A CTCF ZNF121 RAD21 ARID2 IKZF1 REST TRIM22 ZC3H8 SMC3 EIF4G3 ECE1 PIR51422 ENSG00000236936
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51422 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51422 Gene

Genomic Locations for PIR51422 Gene
chr1:21,225,378-21,225,405
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr1:21,551,871-21,551,898
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR51422 Gene

Genes around PIR51422 on UCSC Golden Path with GeneCards custom track

PIR51422 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51422 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51422 Gene

Proteins for PIR51422 Gene

Post-translational modifications for PIR51422 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51422 Gene

Domains & Families for PIR51422 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51422 Gene

Function for PIR51422 Gene

Phenotypes From GWAS Catalog for PIR51422 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51422 Gene

Localization for PIR51422 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51422 Gene

Pathways & Interactions for PIR51422 Gene

PathCards logo

SuperPathways for PIR51422 Gene

No Data Available

Interacting Proteins for PIR51422 Gene

Gene Ontology (GO) - Biological Process for PIR51422 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51422 Gene

Drugs & Compounds for PIR51422 Gene

No Compound Related Data Available

Transcripts for PIR51422 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51422 Gene

No ASD Table

Relevant External Links for PIR51422 Gene

GeneLoc Exon Structure for
PIR51422

No data available for mRNA/cDNA for PIR51422 Gene

Expression for PIR51422 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51422 Gene

Orthologs for PIR51422 Gene

No data available for Orthologs and Evolution for PIR51422 Gene

Paralogs for PIR51422 Gene

No data available for Paralogs for PIR51422 Gene

Variants for PIR51422 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51422 Gene

Disorders for PIR51422 Gene

No disorders were found for PIR51422 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51422 Gene

Publications for PIR51422 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR51422 Gene

Products for PIR51422 Gene

Sources for PIR51422 Gene

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