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Aliases for PIR51277 Gene

Subcategory (RNA class) for PIR51277 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR51277 Gene

No Aliases found

ORGUL Members for PIR51277 Gene

Previous GeneCards Identifiers for PIR51277 Gene

  • GC12P057158

No data available for External Ids for PIR51277 Gene

Summaries for PIR51277 Gene

GeneCards Summary for PIR51277 Gene

PIR51277 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51277 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51277 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51277 Gene

Genomics for PIR51277 Gene

GeneHancer (GH) Regulatory Elements for PIR51277 Gene

Promoters and enhancers for PIR51277 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J056764 Promoter/Enhancer 1.1 EPDnew ENCODE 600.7 +0.1 58 0.2 CTCF SP1 RAD21 RXRA REST ZSCAN4 TRIM22 ZNF341 YY1 ZFHX2 PIR51277 HSD17B6 GPR182 NACA MYO1A SDR9C7 GC12P056811
GH12J056763 Promoter/Enhancer 1 Ensembl ENCODE 600.7 +1.0 1005 1.2 CEBPG CEBPA ZSCAN4 CEBPB FOXA2 KDM1A HLF PIR51277 BAZ2A GPR182 NACA MYO1A SDR9C7 HSD17B6 GC12P056811
GH12J056758 Enhancer 0.9 ENCODE 0.7 -3.7 -3739 1.6 ELF3 CEBPG RERE TFE3 TRIM24 SP1 HNF1A PPARG ZNF384 RXRA ZBTB39 PAN2 NEMP1 ENSG00000257509 DNAJC14 TMEM198B NACA GPR182 CNPY2 SMARCC2
GH12J056768 Enhancer 1 FANTOM5 Ensembl 0.4 +5.4 5369 0.4 CEBPG SP1 SP5 RXRA CEBPA GATAD2A CTBP1 FOXA2 CEBPB JUND APOF HSD17B6 RDH16 SPRYD4 GLS2 GPR182 NACA MYO1A PAN2 PIR51277
GH12J056766 Enhancer 0.6 ENCODE 0.7 +3.5 3498 0.2 PRDM1 IKZF1 IKZF2 PKNOX1 DPF2 EED RUNX3 HDGF NBN IRF4 GPR182 NACA MYO1A SDR9C7 PIR51277 HSD17B6 GC12P056811
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51277 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51277 Gene

Genomic Locations for PIR51277 Gene
chr12:56,763,234-56,763,261
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr12:57,157,018-57,157,045
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR51277 Gene

Genes around PIR51277 on UCSC Golden Path with GeneCards custom track

PIR51277 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51277 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51277 Gene

Proteins for PIR51277 Gene

Post-translational modifications for PIR51277 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51277 Gene

Domains & Families for PIR51277 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51277 Gene

Function for PIR51277 Gene

Phenotypes From GWAS Catalog for PIR51277 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR51277 Gene

Localization for PIR51277 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51277 Gene

Pathways & Interactions for PIR51277 Gene

PathCards logo

SuperPathways for PIR51277 Gene

No Data Available

Interacting Proteins for PIR51277 Gene

Gene Ontology (GO) - Biological Process for PIR51277 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51277 Gene

Drugs & Compounds for PIR51277 Gene

No Compound Related Data Available

Transcripts for PIR51277 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51277 Gene

No ASD Table

Relevant External Links for PIR51277 Gene

GeneLoc Exon Structure for
PIR51277

No data available for mRNA/cDNA for PIR51277 Gene

Expression for PIR51277 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51277 Gene

Orthologs for PIR51277 Gene

No data available for Orthologs and Evolution for PIR51277 Gene

Paralogs for PIR51277 Gene

No data available for Paralogs for PIR51277 Gene

Variants for PIR51277 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51277 Gene

Disorders for PIR51277 Gene

No disorders were found for PIR51277 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51277 Gene

Publications for PIR51277 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR51277 Gene

Products for PIR51277 Gene

Sources for PIR51277 Gene

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