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Aliases for PIR51053 Gene

Subcategory (RNA class) for PIR51053 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR51053 Gene

No Aliases found

ORGUL Members for PIR51053 Gene

Previous GeneCards Identifiers for PIR51053 Gene

  • GC20P032019

No data available for External Ids for PIR51053 Gene

Summaries for PIR51053 Gene

GeneCards Summary for PIR51053 Gene

PIR51053 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR51053 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR51053 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR51053 Gene

Genomics for PIR51053 Gene

GeneHancer (GH) Regulatory Elements for PIR51053 Gene

Promoters and enhancers for PIR51053 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J033433 Enhancer 0.9 Ensembl ENCODE dbSUPER 550.7 +1.8 1830 1.6 MLLT1 SP7 ZNF639 ZBTB17 FOS KLF17 PIR51053 CBFA2T2 E2F1 SNTA1
GH20J033431 Enhancer 0.7 ENCODE dbSUPER 550.7 +0.2 215 1.1 ZNF316 NFE2 NFIC NFE2L2 PIR51053 SNTA1
GH20J033442 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 +11.8 11829 2.7 SP1 MNT ZFX ZNF133 L3MBTL2 PRDM1 ZBTB7A RAD21 GLIS2 ZIC2 SNTA1 PIR51053
GH20J033421 Enhancer 1.6 VISTA Ensembl ENCODE dbSUPER 0.4 -8.5 -8461 3.6 CBFA2T2 IKZF1 DPF2 ZNF148 ZNF316 PHF21A EP300 HDAC1 MTA3 ZBTB11 CBFA2T2 ASIP PIR51053 SNTA1 CDK5RAP1
GH20J033418 Enhancer 1.1 ENCODE dbSUPER 0.4 -12.6 -12586 2.4 ZKSCAN8 CBFA2T2 HCFC1 SIX5 L3MBTL2 TEAD4 SMARCA4 TRIM24 ZNF362 ZNF384 CBFA2T2 CHMP4B PIR51053 CDK5RAP1 SNTA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR51053 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR51053 Gene

Genomic Locations for PIR51053 Gene
chr20:33,432,060-33,432,088
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr20:32,019,866-32,019,894
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR51053 Gene

Genes around PIR51053 on UCSC Golden Path with GeneCards custom track

PIR51053 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR51053 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR51053 Gene

Proteins for PIR51053 Gene

Post-translational modifications for PIR51053 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR51053 Gene

Domains & Families for PIR51053 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR51053 Gene

Function for PIR51053 Gene

Animal Model Products

miRNA for PIR51053 Gene

miRTarBase miRNAs that target PIR51053

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for PIR51053 Gene

Localization for PIR51053 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR51053 Gene

Pathways & Interactions for PIR51053 Gene

SuperPathways for PIR51053 Gene

No Data Available

Interacting Proteins for PIR51053 Gene

Gene Ontology (GO) - Biological Process for PIR51053 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR51053 Gene

Drugs & Compounds for PIR51053 Gene

No Compound Related Data Available

Transcripts for PIR51053 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR51053 Gene

No ASD Table

Relevant External Links for PIR51053 Gene

GeneLoc Exon Structure for
PIR51053

No data available for mRNA/cDNA for PIR51053 Gene

Expression for PIR51053 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR51053 Gene

Orthologs for PIR51053 Gene

No data available for Orthologs and Evolution for PIR51053 Gene

Paralogs for PIR51053 Gene

No data available for Paralogs for PIR51053 Gene

Variants for PIR51053 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR51053 Gene

Disorders for PIR51053 Gene

No disorders were found for PIR51053 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR51053 Gene

Publications for PIR51053 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR51053 Gene

Sources for PIR51053 Gene

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