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Aliases for PIR50916 Gene

Subcategory (RNA class) for PIR50916 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR50916 Gene

No Aliases found

ORGUL Members for PIR50916 Gene

Previous GeneCards Identifiers for PIR50916 Gene

  • GC19P047258
  • GC19P046759
  • GC19P046760
  • GC19P046769
  • GC19P046761
  • GC19P046762
  • GC19P046763
  • GC19P046764
  • GC19P046765
  • GC19P046766
  • GC19P046767
  • GC19P046768

No data available for External Ids for PIR50916 Gene

Summaries for PIR50916 Gene

GeneCards Summary for PIR50916 Gene

PIR50916 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50916 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR50916 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50916 Gene

Genomics for PIR50916 Gene

GeneHancer (GH) Regulatory Elements for PIR50916 Gene

Promoters and enhancers for PIR50916 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046757 Enhancer 0.8 ENCODE 600.7 +1.9 1863 0.2 CC2D1A CTCF ZNF384 RAD21 ARID2 ZNF600 GATAD2A ZNF143 REST LARP7 GC19P046771 PIR50916 PIR51442 PIR36927 FKRP ENSG00000275719
GH19J046753 Enhancer 0.7 ENCODE 600.7 -1.7 -1677 0.2 CTCF AHR RAD21 ARID2 PRDM10 ZNF143 REST ZEB2 TRIM22 SOX6 GC19P046771 PIR50916 PIR36927 FKRP STRN4
GH19J046754 Enhancer 0.4 ENCODE 600.7 -0.2 -234 0.7 SP1 PRDM1 NR2F2 GC19P046771 PIR50916 PIR51442 PIR36927 STRN4 PRKD2 FKRP
GH19J046750 Enhancer 0.9 Ensembl ENCODE 0.4 -5.3 -5345 0.6 CTCF CBFA2T2 SMARCA4 DPF2 HDAC1 TCF12 CTBP1 MTA3 ZBTB2 HDAC2 PRKD2 MIR320E FKRP STRN4 PIR50916
GH19J046748 Enhancer 0.8 ENCODE 0.4 -7.0 -6957 0.2 CTCF GTF2F1 KLF14 ZNF384 ZNF143 TRIM22 SCRT2 EHMT2 FOXA2 ZNF580 STRN4 FKRP PIR50916
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR50916 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR50916 Gene

Genomic Locations for PIR50916 Gene
chr19:46,755,646-46,755,674
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr19:47,258,903-47,258,931
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR50916 Gene

Genes around PIR50916 on UCSC Golden Path with GeneCards custom track

PIR50916 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50916 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50916 Gene

Proteins for PIR50916 Gene

Post-translational modifications for PIR50916 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50916 Gene

Domains & Families for PIR50916 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50916 Gene

Function for PIR50916 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50916 Gene

Localization for PIR50916 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50916 Gene

Pathways & Interactions for PIR50916 Gene

PathCards logo

SuperPathways for PIR50916 Gene

No Data Available

Interacting Proteins for PIR50916 Gene

Gene Ontology (GO) - Biological Process for PIR50916 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50916 Gene

Drugs & Compounds for PIR50916 Gene

No Compound Related Data Available

Transcripts for PIR50916 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50916 Gene

No ASD Table

Relevant External Links for PIR50916 Gene

GeneLoc Exon Structure for
PIR50916

No data available for mRNA/cDNA for PIR50916 Gene

Expression for PIR50916 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50916 Gene

Orthologs for PIR50916 Gene

No data available for Orthologs and Evolution for PIR50916 Gene

Paralogs for PIR50916 Gene

No data available for Paralogs for PIR50916 Gene

Variants for PIR50916 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR50916 Gene

Disorders for PIR50916 Gene

No disorders were found for PIR50916 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50916 Gene

Publications for PIR50916 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR50916 Gene

Products for PIR50916 Gene

Sources for PIR50916 Gene

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