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Aliases for PIR50844 Gene

Subcategory (RNA class) for PIR50844 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR50844 Gene

No Aliases found

ORGUL Members for PIR50844 Gene

Previous GeneCards Identifiers for PIR50844 Gene

  • GC19P033796

No data available for External Ids for PIR50844 Gene

Summaries for PIR50844 Gene

GeneCards Summary for PIR50844 Gene

PIR50844 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50844 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR50844 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50844 Gene

Genomics for PIR50844 Gene

GeneHancer (GH) Regulatory Elements for PIR50844 Gene

Promoters and enhancers for PIR50844 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I033307 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.9 1941 0.2 FOXA2 ZNF211 ZNF473 MAX SALL2 REST ZIC2 FOXA1 ZNF148 GATA3 GC19P033308 PIR50844 CEP89 PDCD5 ZNF507 GPATCH1 WDR88 KIAA0355 LSM14A ENSG00000267130
GH19I033296 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 -4.0 -4023 10.6 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF213 ZNF416 ZNF143 CEBPA-AS1 CEBPA ENSG00000267580 ENSG00000267727 GC19M033302 GPATCH1 ZNF507 CEP89 LSM14A KIAA0355
GH19I033310 Enhancer 0.9 ENCODE dbSUPER 0.4 +5.7 5726 1.1 CTCF ZNF146 RAD21 GATA3 ZNF239 ZNF600 ZBTB20 SMARCA5 SCRT1 ZNF687 CEBPA-AS1 GC19P033308 PIR50844 GC19P033333
GH19I033315 Enhancer 0.9 ENCODE dbSUPER 0.4 +11.7 11717 3.1 FOXA2 ZFP64 SIN3A MAX RAD21 YY1 HIC1 ZNF121 GATA3 ZNF776 CEBPA-AS1 GPATCH1 CEBPG PEPD PIR50844 GC19P033308 GC19P033333
GH19I033309 Enhancer 0.4 dbSUPER 0.8 +4.7 4691 0.9 CTCF ZBTB11 ZBTB20 CEBPA-AS1 GC19P033308 PIR50844 GC19P033333
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR50844 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR50844 Gene

Genomic Locations for PIR50844 Gene
chr19:33,305,429-33,305,459
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr19:33,796,335-33,796,365
(GRCh37/hg19)

Genomic View for PIR50844 Gene

Genes around PIR50844 on UCSC Golden Path with GeneCards custom track

PIR50844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR50844 Gene

ORGUL Member Location for PIR50844 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50844 Gene

Proteins for PIR50844 Gene

Post-translational modifications for PIR50844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50844 Gene

Domains & Families for PIR50844 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50844 Gene

Function for PIR50844 Gene

Phenotypes From GWAS Catalog for PIR50844 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50844 Gene

Localization for PIR50844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50844 Gene

Pathways & Interactions for PIR50844 Gene

SuperPathways for PIR50844 Gene

No Data Available

Interacting Proteins for PIR50844 Gene

Gene Ontology (GO) - Biological Process for PIR50844 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50844 Gene

Drugs & Compounds for PIR50844 Gene

No Compound Related Data Available

Transcripts for PIR50844 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50844 Gene

No ASD Table

Relevant External Links for PIR50844 Gene

GeneLoc Exon Structure for
PIR50844

No data available for mRNA/cDNA for PIR50844 Gene

Expression for PIR50844 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50844 Gene

Orthologs for PIR50844 Gene

No data available for Orthologs and Evolution for PIR50844 Gene

Paralogs for PIR50844 Gene

No data available for Paralogs for PIR50844 Gene

Variants for PIR50844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR50844 Gene

Disorders for PIR50844 Gene

No disorders were found for PIR50844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50844 Gene

Publications for PIR50844 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR50844 Gene

Sources for PIR50844 Gene

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