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Aliases for PIR50741 Gene

Subcategory (RNA class) for PIR50741 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR50741 Gene

No Aliases found

ORGUL Members for PIR50741 Gene

Previous GeneCards Identifiers for PIR50741 Gene

  • GC19M017812

No data available for External Ids for PIR50741 Gene

Summaries for PIR50741 Gene

GeneCards Summary for PIR50741 Gene

PIR50741 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50741 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR50741 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50741 Gene

Genomics for PIR50741 Gene

GeneHancer (GH) Regulatory Elements for PIR50741 Gene

Promoters and enhancers for PIR50741 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J017703 Enhancer 0.9 Ensembl ENCODE 0.7 -2.1 -2077 0.6 SP1 CC2D1A CTCF RAD21 ARID2 ZNF600 ZNF143 REST TRIM22 SP2 INSL3 RPL18A SNORA68 PIR50741 MAP1S
GH19J017716 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 -15.4 -15424 1.1 CBFA2T2 MLLT1 TRIM24 SP1 EGR1 SMARCA4 MTA1 DPF2 IKZF1 ZNF512 MAP1S UNC13A B3GNT3 PIR50741
GH19J017706 Enhancer 0.7 ENCODE 0.7 -4.9 -4884 0.2 SP1 PKNOX1 IKZF1 HDAC1 POLR2A MNT SP2 CTBP1 HDAC2 USF1 INSL3 B3GNT3 UNC13A PIR50741 MAP1S
GH19J017698 Enhancer 0.5 Ensembl 0.7 +2.0 2022 2.8 ZNF121 MCM2 ZNF623 ZFHX2 ZNF16 GLIS1 ENSG00000268743 B3GNT3 INSL3 RPL18A SNORA68 PIR50741 UNC13A
GH19J017711 Enhancer 0.6 Ensembl ENCODE 0.4 -10.0 -10001 1.2 BCOR ZBTB40 UNC13A MAP1S PIR50741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR50741 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR50741 Gene

Genomic Locations for PIR50741 Gene
chr19:17,701,996-17,702,023
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr19:17,812,805-17,812,832
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR50741 Gene

Genes around PIR50741 on UCSC Golden Path with GeneCards custom track

PIR50741 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50741 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50741 Gene

Proteins for PIR50741 Gene

Post-translational modifications for PIR50741 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50741 Gene

Domains & Families for PIR50741 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50741 Gene

Function for PIR50741 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50741 Gene

Localization for PIR50741 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50741 Gene

Pathways & Interactions for PIR50741 Gene

PathCards logo

SuperPathways for PIR50741 Gene

No Data Available

Interacting Proteins for PIR50741 Gene

Gene Ontology (GO) - Biological Process for PIR50741 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50741 Gene

Drugs & Compounds for PIR50741 Gene

No Compound Related Data Available

Transcripts for PIR50741 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50741 Gene

No ASD Table

Relevant External Links for PIR50741 Gene

GeneLoc Exon Structure for
PIR50741

No data available for mRNA/cDNA for PIR50741 Gene

Expression for PIR50741 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50741 Gene

Orthologs for PIR50741 Gene

No data available for Orthologs and Evolution for PIR50741 Gene

Paralogs for PIR50741 Gene

No data available for Paralogs for PIR50741 Gene

Variants for PIR50741 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR50741 Gene

Disorders for PIR50741 Gene

No disorders were found for PIR50741 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50741 Gene

Publications for PIR50741 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR50741 Gene

Products for PIR50741 Gene

Sources for PIR50741 Gene

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