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Aliases for PIR50631 Gene

Subcategory (RNA class) for PIR50631 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR50631 Gene

No Aliases found

ORGUL Members for PIR50631 Gene

No data available for External Ids for PIR50631 Gene

Summaries for PIR50631 Gene

GeneCards Summary for PIR50631 Gene

PIR50631 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50631 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR50631 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50631 Gene

Genomics for PIR50631 Gene

GeneHancer (GH) Regulatory Elements for PIR50631 Gene

Promoters and enhancers for PIR50631 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J005992 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 +1.2 1219 2.2 ZIC2 RFX1 RFX3 FOXA2 NR2F2 RCOR1 SMAD4 PIR50631 CAPS PIR36394 LOC100128568 RFX2
GH19J006022 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE 0.3 -28.1 -28103 1.6 CC2D1A CTCF SP1 PRDM1 RAD21 GLIS2 RXRA ARID2 IKZF1 ZIC2 RFX2 GC19M006019 PIR50631
GH19J005991 Enhancer 0.7 ENCODE 0.7 +3.5 3476 0.1 CBFA2T2 TRIM24 ZNF316 HDAC2 ZNF580 TRIM28 PTBP1 KLF8 BCOR CBX1 PIR36394 PIR50631 LOC100128568
GH19J005990 Enhancer 0.6 ENCODE 0.7 +4.5 4477 0.7 GTF2F1 ZNF600 NRF1 POLR2A EHMT2 NFRKB ZFHX2 ZNF592 VEZF1 TAF7 PIR36394 CAPS PIR50631 LOC100128568
GH19J006013 Enhancer 0.6 Ensembl 0.4 -19.1 -19063 0.9 CEBPG CEBPA CEBPB RARA KDM1A NR2F6 TEAD3 NR2F1 HLF NRTN ACSBG2 VMAC NDUFA11 FUT5 PIR50631 GC19M006019 LOC100128568 RFX2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR50631 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR50631 Gene

Genomic Locations for PIR50631 Gene
chr19:5,994,869-5,994,896
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr19:5,994,880-5,994,907
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR50631 Gene

Genes around PIR50631 on UCSC Golden Path with GeneCards custom track

PIR50631 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50631 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50631 Gene

Proteins for PIR50631 Gene

Post-translational modifications for PIR50631 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR50631 Gene

Domains & Families for PIR50631 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR50631 Gene

Function for PIR50631 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50631 Gene

Localization for PIR50631 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50631 Gene

Pathways & Interactions for PIR50631 Gene

PathCards logo

SuperPathways for PIR50631 Gene

No Data Available

Interacting Proteins for PIR50631 Gene

Gene Ontology (GO) - Biological Process for PIR50631 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50631 Gene

Drugs & Compounds for PIR50631 Gene

No Compound Related Data Available

Transcripts for PIR50631 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50631 Gene

No ASD Table

Relevant External Links for PIR50631 Gene

GeneLoc Exon Structure for
PIR50631

No data available for mRNA/cDNA for PIR50631 Gene

Expression for PIR50631 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50631 Gene

Orthologs for PIR50631 Gene

No data available for Orthologs and Evolution for PIR50631 Gene

Paralogs for PIR50631 Gene

No data available for Paralogs for PIR50631 Gene

Variants for PIR50631 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR50631 Gene

Disorders for PIR50631 Gene

No disorders were found for PIR50631 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50631 Gene

Publications for PIR50631 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR50631 Gene

Products for PIR50631 Gene

Sources for PIR50631 Gene

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