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Aliases for PIR50622 Gene

Subcategory (RNA class) for PIR50622 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR50622 Gene

No Aliases found

ORGUL Members for PIR50622 Gene

Previous GeneCards Identifiers for PIR50622 Gene

  • GC07P043659

No data available for External Ids for PIR50622 Gene

Summaries for PIR50622 Gene

GeneCards Summary for PIR50622 Gene

PIR50622 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR50622 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR50622

Additional gene information for PIR50622 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR50622 Gene

Genomics for PIR50622 Gene

GeneHancer (GH) Regulatory Elements for PIR50622 Gene

Promoters and enhancers for PIR50622 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J043620 Enhancer 0.7 FANTOM5 dbSUPER 650.7 -1.3 -1279 0.3 ZFHX2 ZIC2 EGR2 GC07P043619 PIR50622 STK17A BLVRA URGCP POLM PIR39554 COA1
GH07J043618 Enhancer 0.5 FANTOM5 dbSUPER 650.7 -0.8 -774 0.2 GC07P043619 PIR50622 STK17A URGCP POLM PIR39554 COA1
GH07J043619 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.7 +3.9 3949 8.7 PKNOX1 BACH1 EBF1 POLR2B ZNF316 POLR2A ATF7 ETV6 IKZF2 RUNX3 PIR42681 STK17A COA1 MRPL32 DDX56 BLVRA POLM DBNL GC07M043624 GC07P043619
GH07J043612 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 -6.9 -6851 1.5 RFX1 ZBED1 JUNB BATF ATF2 IRF4 JUND POLR2A BCL11A NFATC1 STK17A POLM PIR39554 GC07P043619 PIR50622 COA1
GH07J043615 Enhancer 0.6 FANTOM5 dbSUPER 0.7 -4.2 -4235 0.4 POLR2A STK17A BLVRA POLM DBNL URGCP GC07P043619 PIR50622 PIR39554 COA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR50622 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR50622 Gene

Genomic Locations for PIR50622 Gene
chr7:43,619,630-43,619,660
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr7:43,659,229-43,659,259
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR50622 Gene

Genes around PIR50622 on UCSC Golden Path with GeneCards custom track

PIR50622 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR50622 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR50622 Gene

ORGUL Member Location for PIR50622 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR50622 Gene

Function for PIR50622 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR50622 Gene

Localization for PIR50622 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR50622 Gene

Pathways & Interactions for PIR50622 Gene

SuperPathways for PIR50622 Gene

No Data Available

Interacting Proteins for PIR50622 Gene

Gene Ontology (GO) - Biological Process for PIR50622 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR50622 Gene

Drugs & Compounds for PIR50622 Gene

No Compound Related Data Available

Transcripts for PIR50622 Gene

fRNAdb Secondary structures for PIR50622 Gene

  • FR307203

Alternative Splicing Database (ASD) splice patterns (SP) for PIR50622 Gene

No ASD Table

Relevant External Links for PIR50622 Gene

GeneLoc Exon Structure for
PIR50622

No data available for mRNA/cDNA for PIR50622 Gene

Expression for PIR50622 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR50622 Gene

Orthologs for PIR50622 Gene

No data available for Orthologs and Evolution for PIR50622 Gene

Paralogs for PIR50622 Gene

No data available for Paralogs for PIR50622 Gene

Variants for PIR50622 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR50622 Gene

Disorders for PIR50622 Gene

No disorders were found for PIR50622 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR50622 Gene

Publications for PIR50622 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR50622 Gene

Sources for PIR50622 Gene

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