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Aliases for PIR49876 Gene

Subcategory (RNA class) for PIR49876 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR49876 Gene

No Aliases found

ORGUL Members for PIR49876 Gene

Previous GeneCards Identifiers for PIR49876 Gene

  • GC10P079592
  • GC10P079846
  • GC10P080433
  • GC10P080717
  • GC10P081141
  • GC10P077834
  • GC10P078067
  • GC10P081921
  • GC10P078300
  • GC10P078543
  • GC10P078792
  • GC10P079041
  • GC10P079291
  • GC10P080212
  • GC10P081439
  • GC10P081809

No data available for External Ids for PIR49876 Gene

Summaries for PIR49876 Gene

GeneCards Summary for PIR49876 Gene

PIR49876 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR49876 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR49876 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR49876 Gene

Genomics for PIR49876 Gene

GeneHancer (GH) Regulatory Elements for PIR49876 Gene

Promoters and enhancers for PIR49876 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077800 Enhancer 0.9 FANTOM5 ENCODE 600.7 -0.5 -484 1.7 RELA MLLT1 IKZF1 PRDM10 IKZF2 DPF2 RUNX3 BCL11A NR2F1 BATF PIR49876 DLG5 GC10P082485 PIR58869
GH10J077803 Enhancer 0.2 Ensembl 600.7 +1.0 1015 0.4 PIR49876 ENSG00000204049 DLG5
GH10J077802 Enhancer 0.2 ENCODE 600.7 +0.5 452 0.2 PIR49876 ENSG00000204049 DLG5
GH10J077799 Enhancer 0.7 FANTOM5 ENCODE dbSUPER 0.7 -2.6 -2608 1 FOSL1 GC10P082485 PIR58869 DLG5 PIR49876 PIRC49
GH10J077835 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 +35.1 35099 4.5 SP1 CBFA2T2 ZNF148 GTF2F1 ZNF687 TRIM24 CREM MLLT1 RAD21 SMARCA4 DLG5 ENSG00000204049 RN7SL284P DLG5-AS1 PIR49876
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR49876 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR49876 Gene

Genomic Locations for PIR49876 Gene
chr10:77,802,186-77,802,215
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr10:79,561,944-79,561,973
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR49876 Gene

Genes around PIR49876 on UCSC Golden Path with GeneCards custom track

PIR49876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR49876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR49876 Gene

Proteins for PIR49876 Gene

Post-translational modifications for PIR49876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR49876 Gene

Domains & Families for PIR49876 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR49876 Gene

Function for PIR49876 Gene

Phenotypes From GWAS Catalog for PIR49876 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR49876 Gene

Localization for PIR49876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR49876 Gene

Pathways & Interactions for PIR49876 Gene

PathCards logo

SuperPathways for PIR49876 Gene

No Data Available

Interacting Proteins for PIR49876 Gene

Gene Ontology (GO) - Biological Process for PIR49876 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR49876 Gene

Drugs & Compounds for PIR49876 Gene

No Compound Related Data Available

Transcripts for PIR49876 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR49876 Gene

No ASD Table

Relevant External Links for PIR49876 Gene

GeneLoc Exon Structure for
PIR49876

No data available for mRNA/cDNA for PIR49876 Gene

Expression for PIR49876 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR49876 Gene

Orthologs for PIR49876 Gene

No data available for Orthologs and Evolution for PIR49876 Gene

Paralogs for PIR49876 Gene

No data available for Paralogs for PIR49876 Gene

Variants for PIR49876 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR49876 Gene

Disorders for PIR49876 Gene

No disorders were found for PIR49876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR49876 Gene

Publications for PIR49876 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR49876 Gene

Products for PIR49876 Gene

Sources for PIR49876 Gene

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